Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Gm7067-201ENSMUST00000207698 1249 ntBASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 AC130829.1-201ENSMUST00000221548 494 ntBASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Ebf4Q8K4J2 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ebf4Q8K4J2 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Ebf4Q8K4J2 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.46□□□□□ -0.74
Ebf4Q8K4J2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ebf4Q8K4J2 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ebf4Q8K4J2 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ebf4Q8K4J2 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ebf4Q8K4J2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ebf4Q8K4J2 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Ebf4Q8K4J2 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ebf4Q8K4J2 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ebf4Q8K4J2 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ebf4Q8K4J2 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Ebf4Q8K4J2 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ebf4Q8K4J2 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Ebf4Q8K4J2 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Mir1894-201ENSMUST00000122802 81 ntBASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Gm3890-201ENSMUST00000182416 207 ntBASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Gm27682-201ENSMUST00000183930 110 ntBASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Gm5356-201ENSMUST00000093326 615 ntBASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Ebf4Q8K4J2 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Gm24845-201ENSMUST00000158034 109 ntBASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Ebf4Q8K4J2 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms