Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm44136-201ENSMUST00000203819 1106 ntBASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Rfwd3Q8CIK8 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Mir5132-201ENSMUST00000175166 71 ntBASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Gm5982-201ENSMUST00000196234 512 ntBASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Gm6905-201ENSMUST00000205729 511 ntBASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Rfwd3Q8CIK8 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Gm23251-201ENSMUST00000103773 110 ntBASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Gm11783-201ENSMUST00000119549 885 ntBASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Gm26047-201ENSMUST00000157308 113 ntBASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Gm26047-202ENSMUST00000198840 115 ntBASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Gm7207-201ENSMUST00000211575 1067 ntBASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Ntng1-201ENSMUST00000051253 327 ntBASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Rfwd3Q8CIK8 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms