Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Gm14017-201ENSMUST00000121934 386 ntBASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Gm6114-201ENSMUST00000182472 968 ntBASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 AA914427-201ENSMUST00000193194 1166 ntBASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Gm5363-201ENSMUST00000211927 938 ntBASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Lrif1Q8CDD9 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.59
Lrif1Q8CDD9 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Lrif1Q8CDD9 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Gm13570-201ENSMUST00000140763 309 ntBASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Gm9192-201ENSMUST00000183221 985 ntBASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Gm19994-201ENSMUST00000217086 586 ntBASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 CT030182.1-201ENSMUST00000225935 533 ntBASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.39□□□□□ -0.59
Lrif1Q8CDD9 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.38□□□□□ -0.59
Lrif1Q8CDD9 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 151.4 ms