Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Atg4bQ8BGE6 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Gm7150-201ENSMUST00000122032 981 ntBASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Gm3329-201ENSMUST00000159873 556 ntBASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Gm43966-201ENSMUST00000203301 612 ntBASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 AC131330.1-201ENSMUST00000227814 1015 ntBASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Ginm1-202ENSMUST00000065124 300 ntBASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Atg4bQ8BGE6 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Gm14193-201ENSMUST00000105067 153 ntBASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Gm12165-201ENSMUST00000117047 342 ntBASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Gm24844-201ENSMUST00000158679 127 ntBASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.84□□□□□ -0.67
Atg4bQ8BGE6 Gm12407-201ENSMUST00000180219 324 ntBASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms