Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.7□□□□□ -0.54
Casc4Q6P2L7 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Casc4Q6P2L7 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Gm11783-201ENSMUST00000119549 885 ntBASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Gm45113-201ENSMUST00000207518 165 ntBASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Abhd11os-203ENSMUST00000222613 363 ntBASIC11.69□□□□□ -0.54
Casc4Q6P2L7 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Erich3-203ENSMUST00000189969 3460 ntBASIC11.69□□□□□ -0.54
Casc4Q6P2L7 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Casc4Q6P2L7 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Gm13916-201ENSMUST00000117368 628 ntBASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Gm12579-201ENSMUST00000118040 783 ntBASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Gm15566-201ENSMUST00000121130 590 ntBASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Gm29499-201ENSMUST00000189151 486 ntBASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Gm28329-201ENSMUST00000191208 689 ntBASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Gm29171-201ENSMUST00000191397 486 ntBASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Spcs1-203ENSMUST00000226374 592 ntBASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Casc4Q6P2L7 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms