Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Gm12266-201ENSMUST00000120311 962 ntBASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Gm17040-202ENSMUST00000170597 889 ntBASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Gm10288-201ENSMUST00000084614 537 ntBASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
ParpbpQ6IRT3 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Gm12106-201ENSMUST00000116006 1200 ntBASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Gm15515-201ENSMUST00000117827 822 ntBASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Gm7857-201ENSMUST00000117957 358 ntBASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Gm27552-201ENSMUST00000183351 62 ntBASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Gm27844-201ENSMUST00000183613 62 ntBASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 Gm45575-201ENSMUST00000210283 548 ntBASIC10.84□□□□□ -0.67
ParpbpQ6IRT3 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms