Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a2Q64739 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a2Q64739 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a2Q64739 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a2Q64739 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.67□□□□□ -0.22
Col11a2Q64739 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Col11a2Q64739 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a2Q64739 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC13.67□□□□□ -0.22
Col11a2Q64739 Gm14639-201ENSMUST00000120850 866 ntBASIC13.67□□□□□ -0.22
Col11a2Q64739 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC13.67□□□□□ -0.22
Col11a2Q64739 Gm16228-201ENSMUST00000162286 809 ntBASIC13.67□□□□□ -0.22
Col11a2Q64739 Gsdmcl2-202ENSMUST00000185391 796 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a2Q64739 Gm29135-201ENSMUST00000188411 612 ntTSL 5 BASIC13.67□□□□□ -0.22
Col11a2Q64739 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a2Q64739 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC13.67□□□□□ -0.22
Col11a2Q64739 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC13.67□□□□□ -0.22
Col11a2Q64739 CT030035.1-201ENSMUST00000223964 935 ntBASIC13.67□□□□□ -0.22
Col11a2Q64739 AC134860.2-201ENSMUST00000225277 1036 ntBASIC13.67□□□□□ -0.22
Col11a2Q64739 AC154806.7-201ENSMUST00000227998 202 ntBASIC13.67□□□□□ -0.22
Col11a2Q64739 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Col11a2Q64739 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a2Q64739 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a2Q64739 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a2Q64739 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Col11a2Q64739 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col11a2Q64739 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col11a2Q64739 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col11a2Q64739 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC13.66□□□□□ -0.22
Col11a2Q64739 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Col11a2Q64739 Gm13426-201ENSMUST00000117887 795 ntBASIC13.66□□□□□ -0.22
Col11a2Q64739 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC13.66□□□□□ -0.22
Col11a2Q64739 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Gm38349-201ENSMUST00000195732 462 ntBASIC13.66□□□□□ -0.22
Col11a2Q64739 AC154585.1-201ENSMUST00000218917 997 ntBASIC13.66□□□□□ -0.22
Col11a2Q64739 AC129217.1-201ENSMUST00000225181 642 ntBASIC13.66□□□□□ -0.22
Col11a2Q64739 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC13.66□□□□□ -0.22
Col11a2Q64739 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Col11a2Q64739 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Col11a2Q64739 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col11a2Q64739 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a2Q64739 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.65□□□□□ -0.22
Col11a2Q64739 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a2Q64739 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Col11a2Q64739 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.65□□□□□ -0.22
Col11a2Q64739 Gm42858-201ENSMUST00000202512 1704 ntBASIC13.65□□□□□ -0.22
Col11a2Q64739 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a2Q64739 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a2Q64739 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a2Q64739 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC13.65□□□□□ -0.22
Col11a2Q64739 Gm25591-201ENSMUST00000177317 94 ntBASIC13.65□□□□□ -0.22
Col11a2Q64739 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a2Q64739 Platr10-202ENSMUST00000191479 818 ntBASIC13.65□□□□□ -0.22
Col11a2Q64739 Gm5650-201ENSMUST00000209641 598 ntBASIC13.65□□□□□ -0.22
Col11a2Q64739 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a2Q64739 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a2Q64739 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a2Q64739 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a2Q64739 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a2Q64739 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a2Q64739 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a2Q64739 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col11a2Q64739 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a2Q64739 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.65□□□□□ -0.22
Col11a2Q64739 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.65□□□□□ -0.22
Col11a2Q64739 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.65□□□□□ -0.22
Col11a2Q64739 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a2Q64739 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a2Q64739 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col11a2Q64739 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Col11a2Q64739 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Col11a2Q64739 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a2Q64739 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC13.64□□□□□ -0.23
Col11a2Q64739 Gm12028-201ENSMUST00000118065 436 ntBASIC13.64□□□□□ -0.23
Col11a2Q64739 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a2Q64739 Gm16441-201ENSMUST00000138176 924 ntBASIC13.64□□□□□ -0.23
Col11a2Q64739 Gm6038-201ENSMUST00000154310 948 ntBASIC13.64□□□□□ -0.23
Col11a2Q64739 Gm24346-201ENSMUST00000158712 194 ntBASIC13.64□□□□□ -0.23
Col11a2Q64739 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col11a2Q64739 1700019D03Rik-207ENSMUST00000191441 638 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Col11a2Q64739 Gm2474-201ENSMUST00000195162 559 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms