Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Scn9aQ62205 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Gm13624-201ENSMUST00000120263 462 ntBASIC13.34□□□□□ -0.27
Scn9aQ62205 Gm11952-201ENSMUST00000121172 821 ntBASIC13.34□□□□□ -0.27
Scn9aQ62205 Gm15658-201ENSMUST00000148293 574 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC13.34□□□□□ -0.27
Scn9aQ62205 Gm38233-201ENSMUST00000194259 807 ntBASIC13.34□□□□□ -0.27
Scn9aQ62205 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.34□□□□□ -0.27
Scn9aQ62205 Gm42732-201ENSMUST00000202887 1197 ntBASIC13.34□□□□□ -0.27
Scn9aQ62205 AC154435.1-201ENSMUST00000223938 959 ntBASIC13.34□□□□□ -0.27
Scn9aQ62205 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.34□□□□□ -0.27
Scn9aQ62205 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Scn9aQ62205 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC13.34□□□□□ -0.27
Scn9aQ62205 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.34□□□□□ -0.27
Scn9aQ62205 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC13.34□□□□□ -0.27
Scn9aQ62205 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Scn9aQ62205 Gm23132-201ENSMUST00000104254 132 ntBASIC13.34□□□□□ -0.27
Scn9aQ62205 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC13.34□□□□□ -0.27
Scn9aQ62205 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC13.34□□□□□ -0.27
Scn9aQ62205 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Gm4943-201ENSMUST00000132879 424 ntBASIC13.34□□□□□ -0.27
Scn9aQ62205 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC13.34□□□□□ -0.27
Scn9aQ62205 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC13.34□□□□□ -0.27
Scn9aQ62205 Gm7445-201ENSMUST00000192115 340 ntBASIC13.34□□□□□ -0.27
Scn9aQ62205 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC13.34□□□□□ -0.27
Scn9aQ62205 Gm43460-201ENSMUST00000202491 1057 ntBASIC13.34□□□□□ -0.27
Scn9aQ62205 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Scn9aQ62205 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Scn9aQ62205 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Scn9aQ62205 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Scn9aQ62205 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Scn9aQ62205 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.33□□□□□ -0.28
Scn9aQ62205 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC13.33□□□□□ -0.28
Scn9aQ62205 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC13.33□□□□□ -0.28
Scn9aQ62205 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC13.33□□□□□ -0.28
Scn9aQ62205 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC13.33□□□□□ -0.28
Scn9aQ62205 Gm8659-201ENSMUST00000120024 1084 ntBASIC13.33□□□□□ -0.28
Scn9aQ62205 Gm6441-201ENSMUST00000120983 696 ntBASIC13.33□□□□□ -0.28
Scn9aQ62205 Gm11736-201ENSMUST00000121468 505 ntBASIC13.33□□□□□ -0.28
Scn9aQ62205 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC13.33□□□□□ -0.28
Scn9aQ62205 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Scn9aQ62205 AC124613.1-201ENSMUST00000198711 88 ntBASIC13.33□□□□□ -0.28
Scn9aQ62205 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Gm42689-201ENSMUST00000202403 404 ntBASIC13.33□□□□□ -0.28
Scn9aQ62205 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.33□□□□□ -0.28
Scn9aQ62205 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Scn9aQ62205 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Scn9aQ62205 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Gm37269-201ENSMUST00000193906 1891 ntBASIC13.33□□□□□ -0.28
Scn9aQ62205 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Scn9aQ62205 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn9aQ62205 Ighv13-1-201ENSMUST00000103480 294 ntBASIC13.32□□□□□ -0.28
Scn9aQ62205 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms