Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VcanQ62059 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VcanQ62059 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
VcanQ62059 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VcanQ62059 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VcanQ62059 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VcanQ62059 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VcanQ62059 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VcanQ62059 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10.49□□□□□ -0.73
VcanQ62059 Gm26047-201ENSMUST00000157308 113 ntBASIC10.49□□□□□ -0.73
VcanQ62059 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC10.49□□□□□ -0.73
VcanQ62059 Gm4866-201ENSMUST00000197408 589 ntBASIC10.49□□□□□ -0.73
VcanQ62059 Gm26047-202ENSMUST00000198840 115 ntBASIC10.49□□□□□ -0.73
VcanQ62059 AC127583.1-201ENSMUST00000224351 540 ntBASIC10.49□□□□□ -0.73
VcanQ62059 3110009E18Rik-201ENSMUST00000027637 1007 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VcanQ62059 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VcanQ62059 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
VcanQ62059 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.49□□□□□ -0.73
VcanQ62059 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
VcanQ62059 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VcanQ62059 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
VcanQ62059 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
VcanQ62059 Gm29101-201ENSMUST00000188329 1471 ntBASIC10.49□□□□□ -0.73
VcanQ62059 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC10.49□□□□□ -0.73
VcanQ62059 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
VcanQ62059 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
VcanQ62059 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VcanQ62059 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC10.48□□□□□ -0.73
VcanQ62059 Gm12745-201ENSMUST00000121767 214 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Gm14048-201ENSMUST00000121864 1268 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC10.48□□□□□ -0.73
VcanQ62059 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Gm44420-201ENSMUST00000203669 490 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Gm35412-201ENSMUST00000220437 999 ntBASIC10.48□□□□□ -0.73
VcanQ62059 AC124772.3-201ENSMUST00000222535 575 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
VcanQ62059 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VcanQ62059 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VcanQ62059 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
VcanQ62059 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC10.48□□□□□ -0.73
VcanQ62059 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.48□□□□□ -0.73
VcanQ62059 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.48□□□□□ -0.73
VcanQ62059 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VcanQ62059 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VcanQ62059 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VcanQ62059 Gpx6-201ENSMUST00000004453 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VcanQ62059 Gm25804-201ENSMUST00000122785 188 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Gm5526-201ENSMUST00000153604 423 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.48□□□□□ -0.73
VcanQ62059 Gm6098-201ENSMUST00000180234 330 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Gm28746-201ENSMUST00000187453 380 ntBASIC10.48□□□□□ -0.73
VcanQ62059 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.48□□□□□ -0.73
VcanQ62059 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Zkscan7-205ENSMUST00000216462 990 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Gm18783-201ENSMUST00000220465 1151 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Gm10015-201ENSMUST00000072570 465 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VcanQ62059 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.48□□□□□ -0.73
VcanQ62059 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
VcanQ62059 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
VcanQ62059 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VcanQ62059 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC10.48□□□□□ -0.73
VcanQ62059 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
VcanQ62059 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
VcanQ62059 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
VcanQ62059 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
VcanQ62059 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
VcanQ62059 Gm14571-201ENSMUST00000118292 570 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Gm13758-201ENSMUST00000118699 743 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.48□□□□□ -0.73
VcanQ62059 Gm28937-201ENSMUST00000185413 695 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Gm29400-201ENSMUST00000187208 695 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Gm28662-201ENSMUST00000188446 695 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Gm28251-201ENSMUST00000188835 695 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Gm37318-201ENSMUST00000194325 695 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Gm38017-201ENSMUST00000194768 695 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Gm37287-201ENSMUST00000195449 695 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Gm37793-201ENSMUST00000195548 695 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Gm38349-201ENSMUST00000195732 462 ntBASIC10.48□□□□□ -0.73
VcanQ62059 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC10.48□□□□□ -0.73
VcanQ62059 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
VcanQ62059 Gm28453-201ENSMUST00000185556 1323 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
VcanQ62059 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.47□□□□□ -0.73
VcanQ62059 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC10.47□□□□□ -0.73
VcanQ62059 Gm9117-201ENSMUST00000177735 1098 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
VcanQ62059 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC10.47□□□□□ -0.73
VcanQ62059 Gm8707-201ENSMUST00000183325 980 ntBASIC10.47□□□□□ -0.73
VcanQ62059 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC10.47□□□□□ -0.73
VcanQ62059 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.47□□□□□ -0.73
VcanQ62059 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
VcanQ62059 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
VcanQ62059 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms