Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.46□□□□□ -0.57
Sim1Q61045 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Sim1Q61045 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sim1Q61045 Gm25076-201ENSMUST00000104098 132 ntBASIC11.46□□□□□ -0.57
Sim1Q61045 Gm8731-201ENSMUST00000118088 412 ntBASIC11.46□□□□□ -0.57
Sim1Q61045 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.46□□□□□ -0.57
Sim1Q61045 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Sim1Q61045 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.46□□□□□ -0.57
Sim1Q61045 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.46□□□□□ -0.57
Sim1Q61045 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Sim1Q61045 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sim1Q61045 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.46□□□□□ -0.57
Sim1Q61045 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC11.46□□□□□ -0.57
Sim1Q61045 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sim1Q61045 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.46□□□□□ -0.57
Sim1Q61045 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Sim1Q61045 Gm6114-201ENSMUST00000182472 968 ntBASIC11.46□□□□□ -0.57
Sim1Q61045 Gm29410-201ENSMUST00000188383 694 ntBASIC11.46□□□□□ -0.57
Sim1Q61045 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sim1Q61045 Gm44158-201ENSMUST00000203881 505 ntBASIC11.46□□□□□ -0.57
Sim1Q61045 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Sim1Q61045 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sim1Q61045 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sim1Q61045 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.46□□□□□ -0.57
Sim1Q61045 Gm4604-201ENSMUST00000025040 390 ntBASIC11.46□□□□□ -0.57
Sim1Q61045 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Sim1Q61045 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sim1Q61045 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sim1Q61045 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sim1Q61045 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sim1Q61045 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.46□□□□□ -0.58
Sim1Q61045 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Sim1Q61045 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Sim1Q61045 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
Sim1Q61045 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Sim1Q61045 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sim1Q61045 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.46□□□□□ -0.58
Sim1Q61045 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.46□□□□□ -0.58
Sim1Q61045 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Sim1Q61045 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.46□□□□□ -0.58
Sim1Q61045 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sim1Q61045 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.45□□□□□ -0.58
Sim1Q61045 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.45□□□□□ -0.58
Sim1Q61045 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sim1Q61045 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sim1Q61045 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Sim1Q61045 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sim1Q61045 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
Sim1Q61045 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Sim1Q61045 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sim1Q61045 Gm13549-201ENSMUST00000118339 796 ntBASIC11.45□□□□□ -0.58
Sim1Q61045 Gm7541-201ENSMUST00000118361 535 ntBASIC11.45□□□□□ -0.58
Sim1Q61045 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC11.45□□□□□ -0.58
Sim1Q61045 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Sim1Q61045 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Sim1Q61045 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.45□□□□□ -0.58
Sim1Q61045 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.45□□□□□ -0.58
Sim1Q61045 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 AC136376.2-201ENSMUST00000228819 490 ntBASIC11.45□□□□□ -0.58
Sim1Q61045 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.45□□□□□ -0.58
Sim1Q61045 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.45□□□□□ -0.58
Sim1Q61045 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.45□□□□□ -0.58
Sim1Q61045 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sim1Q61045 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Sim1Q61045 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Sim1Q61045 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.44□□□□□ -0.58
Sim1Q61045 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms