Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfaip3Q60769 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tnfaip3Q60769 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
Tnfaip3Q60769 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.9□□□□□ -0.67
Tnfaip3Q60769 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Tnfaip3Q60769 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.9□□□□□ -0.67
Tnfaip3Q60769 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Tnfaip3Q60769 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Tnfaip3Q60769 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 H2-Ob-201ENSMUST00000095342 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Gm15131-201ENSMUST00000119124 595 ntBASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.89□□□□□ -0.67
Tnfaip3Q60769 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Gm45770-201ENSMUST00000212105 616 ntBASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Gm4978-201ENSMUST00000071565 801 ntBASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.89□□□□□ -0.67
Tnfaip3Q60769 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Tnfaip3Q60769 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Gm17391-201ENSMUST00000171036 126 ntBASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Gm4654-201ENSMUST00000183305 982 ntBASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Gm3508-201ENSMUST00000186012 792 ntBASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Gm10109-202ENSMUST00000206890 1211 ntBASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Gm45398-201ENSMUST00000210561 165 ntBASIC10.88□□□□□ -0.67
Tnfaip3Q60769 Gm2517-201ENSMUST00000215651 348 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms