Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Xrcc1Q60596 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xrcc1Q60596 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Gm15573-201ENSMUST00000119487 540 ntBASIC11.03□□□□□ -0.64
Xrcc1Q60596 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.03□□□□□ -0.64
Xrcc1Q60596 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.03□□□□□ -0.64
Xrcc1Q60596 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Gm17831-201ENSMUST00000205579 900 ntBASIC11.03□□□□□ -0.64
Xrcc1Q60596 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.03□□□□□ -0.64
Xrcc1Q60596 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.03□□□□□ -0.64
Xrcc1Q60596 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Xrcc1Q60596 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Xrcc1Q60596 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Xrcc1Q60596 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Xrcc1Q60596 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.02□□□□□ -0.64
Xrcc1Q60596 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Xrcc1Q60596 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Xrcc1Q60596 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Xrcc1Q60596 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Xrcc1Q60596 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Xrcc1Q60596 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.02□□□□□ -0.64
Xrcc1Q60596 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Xrcc1Q60596 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Xrcc1Q60596 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Xrcc1Q60596 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Xrcc1Q60596 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.02□□□□□ -0.65
Xrcc1Q60596 Gm11836-201ENSMUST00000121022 441 ntBASIC11.02□□□□□ -0.65
Xrcc1Q60596 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.02□□□□□ -0.65
Xrcc1Q60596 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.02□□□□□ -0.65
Xrcc1Q60596 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Xrcc1Q60596 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Gm43947-201ENSMUST00000203019 959 ntBASIC11.02□□□□□ -0.65
Xrcc1Q60596 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.02□□□□□ -0.65
Xrcc1Q60596 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Xrcc1Q60596 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.02□□□□□ -0.65
Xrcc1Q60596 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Xrcc1Q60596 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.02□□□□□ -0.65
Xrcc1Q60596 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.02□□□□□ -0.65
Xrcc1Q60596 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
Xrcc1Q60596 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.01□□□□□ -0.65
Xrcc1Q60596 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Xrcc1Q60596 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Xrcc1Q60596 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xrcc1Q60596 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.01□□□□□ -0.65
Xrcc1Q60596 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Xrcc1Q60596 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xrcc1Q60596 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Xrcc1Q60596 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.01□□□□□ -0.65
Xrcc1Q60596 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xrcc1Q60596 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Xrcc1Q60596 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Xrcc1Q60596 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms