Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.67□□□□□ -0.54
Bdp1Q571C7 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Gm14176-201ENSMUST00000121302 477 ntBASIC11.67□□□□□ -0.54
Bdp1Q571C7 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Gm38349-201ENSMUST00000195732 462 ntBASIC11.67□□□□□ -0.54
Bdp1Q571C7 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.67□□□□□ -0.54
Bdp1Q571C7 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Bdp1Q571C7 AC164978.2-201ENSMUST00000226645 857 ntBASIC11.67□□□□□ -0.54
Bdp1Q571C7 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Bdp1Q571C7 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Parva-201ENSMUST00000033030 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC11.66□□□□□ -0.54
Bdp1Q571C7 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.66□□□□□ -0.54
Bdp1Q571C7 Gm12240-201ENSMUST00000120178 229 ntBASIC11.66□□□□□ -0.54
Bdp1Q571C7 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC11.66□□□□□ -0.54
Bdp1Q571C7 Gm23555-201ENSMUST00000157815 135 ntBASIC11.66□□□□□ -0.54
Bdp1Q571C7 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Bdp1Q571C7 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Bdp1Q571C7 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Bdp1Q571C7 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Bdp1Q571C7 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Gm18621-201ENSMUST00000222677 679 ntBASIC11.66□□□□□ -0.54
Bdp1Q571C7 Gm3926-201ENSMUST00000223378 1123 ntBASIC11.66□□□□□ -0.54
Bdp1Q571C7 AC116797.2-202ENSMUST00000223587 1017 ntBASIC11.66□□□□□ -0.54
Bdp1Q571C7 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Gm11191-201ENSMUST00000117231 610 ntBASIC11.66□□□□□ -0.54
Bdp1Q571C7 Gm14639-201ENSMUST00000120850 866 ntBASIC11.66□□□□□ -0.54
Bdp1Q571C7 Gm25343-201ENSMUST00000157460 107 ntBASIC11.66□□□□□ -0.54
Bdp1Q571C7 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Bdp1Q571C7 AC140314.1-201ENSMUST00000219549 554 ntBASIC11.66□□□□□ -0.54
Bdp1Q571C7 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.66□□□□□ -0.54
Bdp1Q571C7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Bdp1Q571C7 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Bdp1Q571C7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Bdp1Q571C7 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Bdp1Q571C7 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.65□□□□□ -0.54
Bdp1Q571C7 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Bdp1Q571C7 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Bdp1Q571C7 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Bdp1Q571C7 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Bdp1Q571C7 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Bdp1Q571C7 Gm8302-201ENSMUST00000119217 852 ntBASIC11.65□□□□□ -0.54
Bdp1Q571C7 Gm13002-201ENSMUST00000119286 682 ntBASIC11.65□□□□□ -0.54
Bdp1Q571C7 Gm6238-201ENSMUST00000120999 465 ntBASIC11.65□□□□□ -0.54
Bdp1Q571C7 Gm20091-201ENSMUST00000179683 189 ntBASIC11.65□□□□□ -0.54
Bdp1Q571C7 Gm8707-201ENSMUST00000183325 980 ntBASIC11.65□□□□□ -0.54
Bdp1Q571C7 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Bdp1Q571C7 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.65□□□□□ -0.54
Bdp1Q571C7 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC11.65□□□□□ -0.54
Bdp1Q571C7 AC133496.1-201ENSMUST00000223891 743 ntBASIC11.65□□□□□ -0.54
Bdp1Q571C7 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Bdp1Q571C7 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Bdp1Q571C7 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.65□□□□□ -0.54
Bdp1Q571C7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Bdp1Q571C7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Bdp1Q571C7 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Bdp1Q571C7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Bdp1Q571C7 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Bdp1Q571C7 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Bdp1Q571C7 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Bdp1Q571C7 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms