Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Herc2Q4U2R1 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Herc2Q4U2R1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
Herc2Q4U2R1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Herc2Q4U2R1 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Herc2Q4U2R1 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Herc2Q4U2R1 C920021L13Rik-202ENSMUST00000142433 1330 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Herc2Q4U2R1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Herc2Q4U2R1 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Herc2Q4U2R1 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC6.59□□□□□ -1.35
Herc2Q4U2R1 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC6.59□□□□□ -1.35
Herc2Q4U2R1 Gm37506-201ENSMUST00000192008 143 ntBASIC6.59□□□□□ -1.35
Herc2Q4U2R1 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
Herc2Q4U2R1 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Herc2Q4U2R1 Gm26440-201ENSMUST00000082591 129 ntBASIC6.59□□□□□ -1.35
Herc2Q4U2R1 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Herc2Q4U2R1 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Herc2Q4U2R1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Herc2Q4U2R1 Gm36670-202ENSMUST00000210400 1405 ntTSL 5 BASIC6.59□□□□□ -1.35
Herc2Q4U2R1 A1cf-204ENSMUST00000224564 1432 ntBASIC6.59□□□□□ -1.35
Herc2Q4U2R1 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.36
Herc2Q4U2R1 Gm32255-201ENSMUST00000219456 1349 ntBASIC6.59□□□□□ -1.36
Herc2Q4U2R1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Herc2Q4U2R1 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Herc2Q4U2R1 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Herc2Q4U2R1 Gm7001-201ENSMUST00000219384 1465 ntBASIC6.59□□□□□ -1.36
Herc2Q4U2R1 Gm11489-201ENSMUST00000118342 499 ntBASIC6.59□□□□□ -1.36
Herc2Q4U2R1 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Herc2Q4U2R1 Gm27403-201ENSMUST00000184662 214 ntBASIC6.59□□□□□ -1.36
Herc2Q4U2R1 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC6.59□□□□□ -1.36
Herc2Q4U2R1 Gm44936-201ENSMUST00000207324 735 ntBASIC6.59□□□□□ -1.36
Herc2Q4U2R1 Gm8171-201ENSMUST00000217443 720 ntBASIC6.59□□□□□ -1.36
Herc2Q4U2R1 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Herc2Q4U2R1 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Herc2Q4U2R1 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC6.59□□□□□ -1.36
Herc2Q4U2R1 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Herc2Q4U2R1 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gm19114-201ENSMUST00000193972 1357 ntBASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gm17228-201ENSMUST00000165006 491 ntBASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gm20529-201ENSMUST00000173683 203 ntTSL 5 BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gm30873-201ENSMUST00000207512 1222 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 AC162893.1-201ENSMUST00000207732 1085 ntBASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gm42067-202ENSMUST00000210917 410 ntTSL 2 BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gm5174-201ENSMUST00000171131 1423 ntBASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gm16077-201ENSMUST00000121915 655 ntBASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Trav9n-1-201ENSMUST00000185224 339 ntBASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gm38839-201ENSMUST00000203833 633 ntTSL 2 BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 E330011O21Rik-201ENSMUST00000209468 1107 ntTSL 5 BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 AC116390.1-201ENSMUST00000227975 670 ntBASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gm10291-201ENSMUST00000094175 999 ntBASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gm11427-201ENSMUST00000117952 1696 ntBASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gm8522-201ENSMUST00000118416 1929 ntBASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gm15031-201ENSMUST00000121341 210 ntBASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gm14010-201ENSMUST00000131961 374 ntTSL 2 BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Gm23027-201ENSMUST00000158771 158 ntBASIC6.58□□□□□ -1.36
Herc2Q4U2R1 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms