Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ssbp4Q3U4B1 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ssbp4Q3U4B1 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Ssbp4Q3U4B1 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ssbp4Q3U4B1 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ssbp4Q3U4B1 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ssbp4Q3U4B1 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.73□□□□□ -0.85
Ssbp4Q3U4B1 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 CT009757.3-201ENSMUST00000223367 2320 ntBASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Gm16166-201ENSMUST00000118291 787 ntBASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Gm24398-201ENSMUST00000157870 109 ntBASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Gm28324-201ENSMUST00000187913 264 ntBASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Gm37458-201ENSMUST00000194055 410 ntBASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Gm44329-201ENSMUST00000197469 112 ntBASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 AC140293.1-201ENSMUST00000225626 1247 ntBASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Gm23105-201ENSMUST00000083719 134 ntBASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Gm18642-201ENSMUST00000206642 1400 ntBASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ssbp4Q3U4B1 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Ssbp4Q3U4B1 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Gm8194-201ENSMUST00000159783 859 ntBASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Gm25072-201ENSMUST00000175233 235 ntBASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Gm42657-201ENSMUST00000201746 211 ntBASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Ssbp4Q3U4B1 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms