Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.08□□□□□ -0.64
Hoxc4Q08624 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Hoxc4Q08624 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.07□□□□□ -0.64
Hoxc4Q08624 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.07□□□□□ -0.64
Hoxc4Q08624 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.07□□□□□ -0.64
Hoxc4Q08624 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Gm29155-201ENSMUST00000185910 269 ntBASIC11.07□□□□□ -0.64
Hoxc4Q08624 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Gm43380-201ENSMUST00000200421 220 ntBASIC11.07□□□□□ -0.64
Hoxc4Q08624 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.07□□□□□ -0.64
Hoxc4Q08624 Gm39288-201ENSMUST00000210554 446 ntBASIC11.07□□□□□ -0.64
Hoxc4Q08624 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Mt1-202ENSMUST00000211807 1085 ntBASIC11.07□□□□□ -0.64
Hoxc4Q08624 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.07□□□□□ -0.64
Hoxc4Q08624 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.07□□□□□ -0.64
Hoxc4Q08624 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.07□□□□□ -0.64
Hoxc4Q08624 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Hoxc4Q08624 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hoxc4Q08624 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.06□□□□□ -0.64
Hoxc4Q08624 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.06□□□□□ -0.64
Hoxc4Q08624 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.06□□□□□ -0.64
Hoxc4Q08624 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Gm19091-201ENSMUST00000208120 978 ntBASIC11.06□□□□□ -0.64
Hoxc4Q08624 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Hoxc4Q08624 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.06□□□□□ -0.64
Hoxc4Q08624 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.06□□□□□ -0.64
Hoxc4Q08624 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hoxc4Q08624 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms