Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smn1P97801 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smn1P97801 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smn1P97801 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smn1P97801 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smn1P97801 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smn1P97801 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.84□□□□□ -0.83
Smn1P97801 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smn1P97801 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smn1P97801 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smn1P97801 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smn1P97801 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smn1P97801 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smn1P97801 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smn1P97801 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smn1P97801 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smn1P97801 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smn1P97801 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smn1P97801 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Smn1P97801 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Smn1P97801 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.84
Smn1P97801 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Gm29245-201ENSMUST00000187332 1416 ntBASIC9.83□□□□□ -0.84
Smn1P97801 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Gm43321-201ENSMUST00000198897 2409 ntBASIC9.83□□□□□ -0.84
Smn1P97801 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC9.83□□□□□ -0.84
Smn1P97801 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Gm11425-201ENSMUST00000119608 498 ntBASIC9.83□□□□□ -0.84
Smn1P97801 Gm11424-201ENSMUST00000121929 829 ntBASIC9.83□□□□□ -0.84
Smn1P97801 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.83□□□□□ -0.84
Smn1P97801 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC9.83□□□□□ -0.84
Smn1P97801 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC9.83□□□□□ -0.84
Smn1P97801 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC9.83□□□□□ -0.84
Smn1P97801 Gm37102-201ENSMUST00000195740 1105 ntBASIC9.83□□□□□ -0.84
Smn1P97801 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
Smn1P97801 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC9.83□□□□□ -0.84
Smn1P97801 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC9.83□□□□□ -0.84
Smn1P97801 Gm7046-201ENSMUST00000221351 977 ntBASIC9.83□□□□□ -0.84
Smn1P97801 Gm18065-201ENSMUST00000221395 526 ntBASIC9.83□□□□□ -0.84
Smn1P97801 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Smn1P97801 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Smn1P97801 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Smn1P97801 Gm9396-201ENSMUST00000076703 567 ntBASIC9.83□□□□□ -0.84
Smn1P97801 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC9.83□□□□□ -0.84
Smn1P97801 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC9.83□□□□□ -0.84
Smn1P97801 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Smn1P97801 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Smn1P97801 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Gm15991-202ENSMUST00000212123 3565 ntBASIC9.83□□□□□ -0.84
Smn1P97801 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Smn1P97801 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Smn1P97801 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC9.82□□□□□ -0.84
Smn1P97801 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Smn1P97801 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Smn1P97801 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.82□□□□□ -0.84
Smn1P97801 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smn1P97801 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Smn1P97801 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Smn1P97801 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smn1P97801 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.82□□□□□ -0.84
Smn1P97801 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Smn1P97801 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
Smn1P97801 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.82□□□□□ -0.84
Smn1P97801 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Smn1P97801 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms