Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Npas1P97459 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.66□□□□□ -0.86
Npas1P97459 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.66□□□□□ -0.86
Npas1P97459 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC9.66□□□□□ -0.86
Npas1P97459 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Npas1P97459 Smyd1-202ENSMUST00000114186 3292 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Npas1P97459 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC9.66□□□□□ -0.86
Npas1P97459 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC9.66□□□□□ -0.86
Npas1P97459 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC9.66□□□□□ -0.86
Npas1P97459 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC9.66□□□□□ -0.86
Npas1P97459 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC9.66□□□□□ -0.86
Npas1P97459 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC9.66□□□□□ -0.86
Npas1P97459 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC9.66□□□□□ -0.86
Npas1P97459 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC9.66□□□□□ -0.86
Npas1P97459 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Gm9794-201ENSMUST00000202370 423 ntBASIC9.66□□□□□ -0.86
Npas1P97459 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Npas1P97459 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Npas1P97459 Gm10699-201ENSMUST00000098916 2130 ntBASIC9.66□□□□□ -0.86
Npas1P97459 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Npas1P97459 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Npas1P97459 Galnt16-206ENSMUST00000219993 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
Npas1P97459 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Npas1P97459 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Npas1P97459 Rgr-203ENSMUST00000225070 4704 ntBASIC9.65□□□□□ -0.86
Npas1P97459 Zcchc12-202ENSMUST00000115256 2197 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Npas1P97459 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Npas1P97459 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC9.65□□□□□ -0.86
Npas1P97459 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Npas1P97459 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Npas1P97459 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Npas1P97459 Gm4984-201ENSMUST00000115987 360 ntBASIC9.65□□□□□ -0.86
Npas1P97459 Gm12490-201ENSMUST00000120255 560 ntBASIC9.65□□□□□ -0.86
Npas1P97459 Gm11658-201ENSMUST00000120913 1008 ntBASIC9.65□□□□□ -0.86
Npas1P97459 Gm14247-201ENSMUST00000120950 237 ntBASIC9.65□□□□□ -0.86
Npas1P97459 Gm13570-201ENSMUST00000140763 309 ntBASIC9.65□□□□□ -0.86
Npas1P97459 Gm25261-201ENSMUST00000157416 134 ntBASIC9.65□□□□□ -0.86
Npas1P97459 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.65□□□□□ -0.86
Npas1P97459 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC9.65□□□□□ -0.86
Npas1P97459 Gm2467-201ENSMUST00000182266 1010 ntBASIC9.65□□□□□ -0.86
Npas1P97459 Gm6981-201ENSMUST00000182467 1008 ntBASIC9.65□□□□□ -0.86
Npas1P97459 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Npas1P97459 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC9.65□□□□□ -0.86
Npas1P97459 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Npas1P97459 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC9.65□□□□□ -0.86
Npas1P97459 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC9.65□□□□□ -0.86
Npas1P97459 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC9.65□□□□□ -0.86
Npas1P97459 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Npas1P97459 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.65□□□□□ -0.86
Npas1P97459 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Npas1P97459 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms