Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CiitaP79621 Gm29067-201ENSMUST00000190821 470 ntBASIC12.49□□□□□ -0.41
CiitaP79621 Gm43966-201ENSMUST00000203301 612 ntBASIC12.49□□□□□ -0.41
CiitaP79621 Gm6722-201ENSMUST00000221586 390 ntBASIC12.49□□□□□ -0.41
CiitaP79621 Gm5468-202ENSMUST00000227851 682 ntBASIC12.49□□□□□ -0.41
CiitaP79621 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CiitaP79621 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CiitaP79621 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CiitaP79621 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CiitaP79621 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CiitaP79621 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
CiitaP79621 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CiitaP79621 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CiitaP79621 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.49□□□□□ -0.41
CiitaP79621 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.49□□□□□ -0.41
CiitaP79621 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CiitaP79621 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CiitaP79621 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.49□□□□□ -0.41
CiitaP79621 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CiitaP79621 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CiitaP79621 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.49□□□□□ -0.41
CiitaP79621 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.49□□□□□ -0.41
CiitaP79621 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CiitaP79621 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CiitaP79621 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.48□□□□□ -0.41
CiitaP79621 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CiitaP79621 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.48□□□□□ -0.41
CiitaP79621 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CiitaP79621 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CiitaP79621 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CiitaP79621 Gm25766-201ENSMUST00000104101 131 ntBASIC12.48□□□□□ -0.41
CiitaP79621 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CiitaP79621 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CiitaP79621 n-R5s84-201ENSMUST00000122591 109 ntBASIC12.48□□□□□ -0.41
CiitaP79621 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CiitaP79621 Gm9358-201ENSMUST00000183067 927 ntBASIC12.48□□□□□ -0.41
CiitaP79621 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.48□□□□□ -0.41
CiitaP79621 Gm34023-201ENSMUST00000195539 217 ntBASIC12.48□□□□□ -0.41
CiitaP79621 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.48□□□□□ -0.41
CiitaP79621 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC12.48□□□□□ -0.41
CiitaP79621 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.48□□□□□ -0.41
CiitaP79621 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CiitaP79621 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.48□□□□□ -0.41
CiitaP79621 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Cog3-203ENSMUST00000227473 4197 ntBASIC12.48□□□□□ -0.41
CiitaP79621 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.48□□□□□ -0.41
CiitaP79621 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CiitaP79621 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CiitaP79621 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CiitaP79621 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
CiitaP79621 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CiitaP79621 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.47□□□□□ -0.41
CiitaP79621 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.47□□□□□ -0.41
CiitaP79621 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CiitaP79621 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CiitaP79621 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.47□□□□□ -0.41
CiitaP79621 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 Gm12218-201ENSMUST00000117666 399 ntBASIC12.47□□□□□ -0.41
CiitaP79621 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12.47□□□□□ -0.41
CiitaP79621 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.47□□□□□ -0.41
CiitaP79621 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.47□□□□□ -0.41
CiitaP79621 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.47□□□□□ -0.41
CiitaP79621 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CiitaP79621 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.47□□□□□ -0.41
CiitaP79621 Gm23694-201ENSMUST00000179335 110 ntBASIC12.47□□□□□ -0.41
CiitaP79621 Gm8197-202ENSMUST00000193422 934 ntBASIC12.47□□□□□ -0.41
CiitaP79621 Gm45219-201ENSMUST00000205602 465 ntBASIC12.47□□□□□ -0.41
CiitaP79621 Gm45856-201ENSMUST00000212752 416 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms