Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rrp1P56183 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC12.97□□□□□ -0.33
Rrp1P56183 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.97□□□□□ -0.33
Rrp1P56183 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rrp1P56183 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rrp1P56183 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Gm11509-201ENSMUST00000117358 325 ntBASIC12.97□□□□□ -0.33
Rrp1P56183 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.97□□□□□ -0.33
Rrp1P56183 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.97□□□□□ -0.33
Rrp1P56183 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Gm44008-201ENSMUST00000204345 412 ntBASIC12.97□□□□□ -0.33
Rrp1P56183 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.97□□□□□ -0.33
Rrp1P56183 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.97□□□□□ -0.33
Rrp1P56183 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.97□□□□□ -0.33
Rrp1P56183 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.97□□□□□ -0.33
Rrp1P56183 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rrp1P56183 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.97□□□□□ -0.33
Rrp1P56183 Gm45199-201ENSMUST00000207640 1507 ntBASIC12.97□□□□□ -0.33
Rrp1P56183 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC12.97□□□□□ -0.33
Rrp1P56183 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rrp1P56183 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.96□□□□□ -0.33
Rrp1P56183 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Rrp1P56183 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Rrp1P56183 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Rrp1P56183 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.96□□□□□ -0.33
Rrp1P56183 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Gm5616-201ENSMUST00000165252 384 ntBASIC12.96□□□□□ -0.33
Rrp1P56183 Gm8741-201ENSMUST00000174736 384 ntBASIC12.96□□□□□ -0.33
Rrp1P56183 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.96□□□□□ -0.33
Rrp1P56183 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Gm44651-201ENSMUST00000207343 372 ntBASIC12.96□□□□□ -0.33
Rrp1P56183 Gm45224-201ENSMUST00000208203 414 ntBASIC12.96□□□□□ -0.33
Rrp1P56183 Gm17827-201ENSMUST00000211825 742 ntBASIC12.96□□□□□ -0.33
Rrp1P56183 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Gm9257-201ENSMUST00000221254 232 ntBASIC12.96□□□□□ -0.33
Rrp1P56183 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.96□□□□□ -0.33
Rrp1P56183 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rrp1P56183 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Rrp1P56183 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rrp1P56183 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rrp1P56183 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Rrp1P56183 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.96□□□□□ -0.34
Rrp1P56183 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.96□□□□□ -0.34
Rrp1P56183 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.96□□□□□ -0.34
Rrp1P56183 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
Rrp1P56183 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.95□□□□□ -0.34
Rrp1P56183 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp1P56183 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Rrp1P56183 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp1P56183 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.95□□□□□ -0.34
Rrp1P56183 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp1P56183 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rrp1P56183 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp1P56183 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rrp1P56183 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms