Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.13□□□□□ -0.47
NcanP55066 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC12.13□□□□□ -0.47
NcanP55066 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC12.13□□□□□ -0.47
NcanP55066 AC124613.1-201ENSMUST00000198711 88 ntBASIC12.13□□□□□ -0.47
NcanP55066 Gm43106-201ENSMUST00000199485 637 ntBASIC12.13□□□□□ -0.47
NcanP55066 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.13□□□□□ -0.47
NcanP55066 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC12.13□□□□□ -0.47
NcanP55066 Cacna2d3-208ENSMUST00000225985 918 ntBASIC12.13□□□□□ -0.47
NcanP55066 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.13□□□□□ -0.47
NcanP55066 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.13□□□□□ -0.47
NcanP55066 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC12.13□□□□□ -0.47
NcanP55066 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
NcanP55066 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
NcanP55066 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
NcanP55066 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.12□□□□□ -0.47
NcanP55066 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.12□□□□□ -0.47
NcanP55066 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
NcanP55066 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
NcanP55066 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.12□□□□□ -0.47
NcanP55066 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Gm16209-201ENSMUST00000118457 627 ntBASIC12.12□□□□□ -0.47
NcanP55066 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.12□□□□□ -0.47
NcanP55066 Gm6758-201ENSMUST00000119643 1055 ntBASIC12.12□□□□□ -0.47
NcanP55066 Gm10171-201ENSMUST00000126220 628 ntBASIC12.12□□□□□ -0.47
NcanP55066 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Gm20493-201ENSMUST00000173706 213 ntBASIC12.12□□□□□ -0.47
NcanP55066 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Gm44908-201ENSMUST00000208610 266 ntBASIC12.12□□□□□ -0.47
NcanP55066 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
NcanP55066 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
NcanP55066 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Gm10233-201ENSMUST00000089275 628 ntBASIC12.12□□□□□ -0.47
NcanP55066 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.12□□□□□ -0.47
NcanP55066 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC12.12□□□□□ -0.47
NcanP55066 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
NcanP55066 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NcanP55066 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
NcanP55066 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.12□□□□□ -0.47
NcanP55066 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
NcanP55066 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC12.11□□□□□ -0.47
NcanP55066 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.11□□□□□ -0.47
NcanP55066 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
NcanP55066 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
NcanP55066 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
NcanP55066 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NcanP55066 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
NcanP55066 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.11□□□□□ -0.47
NcanP55066 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
NcanP55066 Gm14524-201ENSMUST00000121066 683 ntBASIC12.11□□□□□ -0.47
NcanP55066 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC12.11□□□□□ -0.47
NcanP55066 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.11□□□□□ -0.47
NcanP55066 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Gm18733-202ENSMUST00000174447 401 ntBASIC12.11□□□□□ -0.47
NcanP55066 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
NcanP55066 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms