Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TubP50586 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
TubP50586 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TubP50586 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.82□□□□□ -0.52
TubP50586 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
TubP50586 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TubP50586 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC11.82□□□□□ -0.52
TubP50586 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
TubP50586 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TubP50586 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
TubP50586 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.81□□□□□ -0.52
TubP50586 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.81□□□□□ -0.52
TubP50586 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
TubP50586 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
TubP50586 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.81□□□□□ -0.52
TubP50586 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.81□□□□□ -0.52
TubP50586 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.81□□□□□ -0.52
TubP50586 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.81□□□□□ -0.52
TubP50586 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.81□□□□□ -0.52
TubP50586 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.81□□□□□ -0.52
TubP50586 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.81□□□□□ -0.52
TubP50586 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
TubP50586 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
TubP50586 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TubP50586 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
TubP50586 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.8□□□□□ -0.52
TubP50586 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.8□□□□□ -0.52
TubP50586 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.8□□□□□ -0.52
TubP50586 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.8□□□□□ -0.52
TubP50586 Gm4654-201ENSMUST00000183305 982 ntBASIC11.8□□□□□ -0.52
TubP50586 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.8□□□□□ -0.52
TubP50586 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.8□□□□□ -0.52
TubP50586 Gm7504-201ENSMUST00000201449 424 ntBASIC11.8□□□□□ -0.52
TubP50586 Gm8574-201ENSMUST00000203207 924 ntBASIC11.8□□□□□ -0.52
TubP50586 Gm17831-201ENSMUST00000205579 900 ntBASIC11.8□□□□□ -0.52
TubP50586 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.8□□□□□ -0.52
TubP50586 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Gm8959-201ENSMUST00000213150 571 ntBASIC11.8□□□□□ -0.52
TubP50586 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
TubP50586 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
TubP50586 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TubP50586 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.79□□□□□ -0.52
TubP50586 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TubP50586 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TubP50586 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms