Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm38271-201ENSMUST00000192296 1603 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Gm1840-201ENSMUST00000051687 1432 ntBASIC14.15□□□□□ -0.14
Nkx1-2P42580 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nkx1-2P42580 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.15
Nkx1-2P42580 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Nkx1-2P42580 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Nkx1-2P42580 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Gm42602-201ENSMUST00000200288 3224 ntBASIC14.14□□□□□ -0.15
Nkx1-2P42580 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.14□□□□□ -0.15
Nkx1-2P42580 Gm27627-201ENSMUST00000183644 150 ntBASIC14.14□□□□□ -0.15
Nkx1-2P42580 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.14□□□□□ -0.15
Nkx1-2P42580 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx1-2P42580 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.14□□□□□ -0.15
Nkx1-2P42580 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.14□□□□□ -0.15
Nkx1-2P42580 Gm18065-201ENSMUST00000221395 526 ntBASIC14.14□□□□□ -0.15
Nkx1-2P42580 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx1-2P42580 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nkx1-2P42580 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC14.13□□□□□ -0.15
Nkx1-2P42580 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Nkx1-2P42580 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Nkx1-2P42580 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.13□□□□□ -0.15
Nkx1-2P42580 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nkx1-2P42580 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.13□□□□□ -0.15
Nkx1-2P42580 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Gm270-201ENSMUST00000223010 976 ntBASIC14.13□□□□□ -0.15
Nkx1-2P42580 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Gm44573-201ENSMUST00000191753 2370 ntBASIC14.13□□□□□ -0.15
Nkx1-2P42580 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 AC122273.1-201ENSMUST00000213634 2327 ntBASIC14.13□□□□□ -0.15
Nkx1-2P42580 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Nkx1-2P42580 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nkx1-2P42580 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nkx1-2P42580 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx1-2P42580 Gm6124-201ENSMUST00000188240 2580 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms