Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VhlP40338 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VhlP40338 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VhlP40338 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VhlP40338 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
VhlP40338 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC9.46□□□□□ -0.9
VhlP40338 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VhlP40338 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC9.46□□□□□ -0.9
VhlP40338 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
VhlP40338 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
VhlP40338 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.9
VhlP40338 Gm13347-201ENSMUST00000120298 1353 ntBASIC9.46□□□□□ -0.9
VhlP40338 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC9.46□□□□□ -0.9
VhlP40338 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VhlP40338 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
VhlP40338 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
VhlP40338 Gm1840-201ENSMUST00000051687 1432 ntBASIC9.46□□□□□ -0.9
VhlP40338 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
VhlP40338 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
VhlP40338 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
VhlP40338 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
VhlP40338 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.46□□□□□ -0.9
VhlP40338 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
VhlP40338 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.45□□□□□ -0.9
VhlP40338 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
VhlP40338 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
VhlP40338 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
VhlP40338 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
VhlP40338 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
VhlP40338 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Gm25214-201ENSMUST00000104573 129 ntBASIC9.45□□□□□ -0.9
VhlP40338 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
VhlP40338 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC9.45□□□□□ -0.9
VhlP40338 Gm8062-201ENSMUST00000139696 444 ntBASIC9.45□□□□□ -0.9
VhlP40338 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC9.45□□□□□ -0.9
VhlP40338 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC9.45□□□□□ -0.9
VhlP40338 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.45□□□□□ -0.9
VhlP40338 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC9.45□□□□□ -0.9
VhlP40338 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC9.45□□□□□ -0.9
VhlP40338 Mir8093-201ENSMUST00000185043 137 ntBASIC9.45□□□□□ -0.9
VhlP40338 Rps4l-202ENSMUST00000204242 789 ntBASIC9.45□□□□□ -0.9
VhlP40338 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC9.45□□□□□ -0.9
VhlP40338 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC9.45□□□□□ -0.9
VhlP40338 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
VhlP40338 Gm8752-201ENSMUST00000173427 1694 ntBASIC9.45□□□□□ -0.9
VhlP40338 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.45□□□□□ -0.9
VhlP40338 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
VhlP40338 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
VhlP40338 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VhlP40338 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.44□□□□□ -0.9
VhlP40338 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
VhlP40338 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VhlP40338 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
VhlP40338 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VhlP40338 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
VhlP40338 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VhlP40338 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
VhlP40338 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VhlP40338 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VhlP40338 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
VhlP40338 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VhlP40338 Gm17244-201ENSMUST00000192482 3416 ntBASIC9.44□□□□□ -0.9
VhlP40338 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VhlP40338 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
VhlP40338 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
VhlP40338 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
VhlP40338 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
VhlP40338 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
VhlP40338 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
VhlP40338 Gm27514-201ENSMUST00000183692 110 ntBASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms