Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Gm23200-201ENSMUST00000104379 132 ntBASIC10.09□□□□□ -0.79
Upk2P38575 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Upk2P38575 Gm14058-201ENSMUST00000116082 735 ntBASIC10.09□□□□□ -0.79
Upk2P38575 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.09□□□□□ -0.79
Upk2P38575 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.09□□□□□ -0.79
Upk2P38575 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC10.09□□□□□ -0.79
Upk2P38575 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Upk2P38575 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC10.09□□□□□ -0.79
Upk2P38575 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.09□□□□□ -0.79
Upk2P38575 Ntng1-201ENSMUST00000051253 327 ntBASIC10.09□□□□□ -0.79
Upk2P38575 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
Upk2P38575 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.09□□□□□ -0.79
Upk2P38575 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC10.09□□□□□ -0.79
Upk2P38575 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.09□□□□□ -0.79
Upk2P38575 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Upk2P38575 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Upk2P38575 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.08□□□□□ -0.8
Upk2P38575 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.08□□□□□ -0.8
Upk2P38575 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.08□□□□□ -0.8
Upk2P38575 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.08□□□□□ -0.8
Upk2P38575 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Upk2P38575 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Upk2P38575 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.08□□□□□ -0.8
Upk2P38575 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Upk2P38575 Gm13809-201ENSMUST00000117921 597 ntBASIC10.08□□□□□ -0.8
Upk2P38575 Gm7857-201ENSMUST00000117957 358 ntBASIC10.08□□□□□ -0.8
Upk2P38575 Gm8731-201ENSMUST00000118088 412 ntBASIC10.08□□□□□ -0.8
Upk2P38575 Gm11941-201ENSMUST00000119904 610 ntBASIC10.08□□□□□ -0.8
Upk2P38575 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.08□□□□□ -0.8
Upk2P38575 Gm15566-201ENSMUST00000121130 590 ntBASIC10.08□□□□□ -0.8
Upk2P38575 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.08□□□□□ -0.8
Upk2P38575 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.08□□□□□ -0.8
Upk2P38575 Gm3150-201ENSMUST00000166418 204 ntBASIC10.08□□□□□ -0.8
Upk2P38575 Gm9540-201ENSMUST00000188230 478 ntBASIC10.08□□□□□ -0.8
Upk2P38575 Gm6905-201ENSMUST00000205729 511 ntBASIC10.08□□□□□ -0.8
Upk2P38575 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC10.08□□□□□ -0.8
Upk2P38575 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.08□□□□□ -0.8
Upk2P38575 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.08□□□□□ -0.8
Upk2P38575 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.08□□□□□ -0.8
Upk2P38575 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
Upk2P38575 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Upk2P38575 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Upk2P38575 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Upk2P38575 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.07□□□□□ -0.8
Upk2P38575 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.07□□□□□ -0.8
Upk2P38575 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Upk2P38575 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.07□□□□□ -0.8
Upk2P38575 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Upk2P38575 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Upk2P38575 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Upk2P38575 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Upk2P38575 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Upk2P38575 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.07□□□□□ -0.8
Upk2P38575 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Upk2P38575 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Upk2P38575 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms