Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.86□□□□□ -0.67
Clk1P22518 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Clk1P22518 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.86□□□□□ -0.67
Clk1P22518 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC10.86□□□□□ -0.67
Clk1P22518 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Clk1P22518 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Clk1P22518 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Gm10764-202ENSMUST00000220397 2335 ntBASIC10.86□□□□□ -0.67
Clk1P22518 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Clk1P22518 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Cd8a-201ENSMUST00000066747 3128 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.86□□□□□ -0.67
Clk1P22518 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clk1P22518 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.85□□□□□ -0.67
Clk1P22518 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Clk1P22518 Cir1-201ENSMUST00000058615 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.85□□□□□ -0.67
Clk1P22518 Gm37648-201ENSMUST00000192072 2563 ntBASIC10.85□□□□□ -0.67
Clk1P22518 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Clk1P22518 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.85□□□□□ -0.67
Clk1P22518 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Gm4760-201ENSMUST00000119663 1030 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC10.85□□□□□ -0.67
Clk1P22518 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.85□□□□□ -0.67
Clk1P22518 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Gm29615-201ENSMUST00000185371 697 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Gm28224-201ENSMUST00000186078 697 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Gm29001-201ENSMUST00000186177 697 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Gm28292-201ENSMUST00000186593 697 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Gm28101-201ENSMUST00000187608 697 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Gm29076-201ENSMUST00000187689 697 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Gm28302-201ENSMUST00000187931 697 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Gm28646-201ENSMUST00000188220 697 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Gm28205-201ENSMUST00000189177 697 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Gm29032-201ENSMUST00000189797 697 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Gm28695-201ENSMUST00000190300 697 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Gm37448-201ENSMUST00000192795 697 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.85□□□□□ -0.67
Clk1P22518 Gm17812-201ENSMUST00000204935 318 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Clk1P22518 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.85□□□□□ -0.67
Clk1P22518 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Clk1P22518 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Rdh9-201ENSMUST00000052652 2698 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Mrps14-203ENSMUST00000135680 2999 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Clk1P22518 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Clk1P22518 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.84□□□□□ -0.67
Clk1P22518 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC10.84□□□□□ -0.67
Clk1P22518 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.84□□□□□ -0.67
Clk1P22518 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Clk1P22518 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Clk1P22518 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Clk1P22518 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms