Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm7207-201ENSMUST00000211575 1067 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm19885-201ENSMUST00000212853 343 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC9.25□□□□□ -0.93
Hoxd3P09027 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC9.25□□□□□ -0.93
Hoxd3P09027 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC9.25□□□□□ -0.93
Hoxd3P09027 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC9.25□□□□□ -0.93
Hoxd3P09027 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC9.25□□□□□ -0.93
Hoxd3P09027 AC116797.2-202ENSMUST00000223587 1017 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm10288-201ENSMUST00000084614 537 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm10728-201ENSMUST00000194292 1829 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC9.25□□□□□ -0.93
Hoxd3P09027 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC9.25□□□□□ -0.93
Hoxd3P09027 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm10152-201ENSMUST00000193475 1344 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm43447-201ENSMUST00000198471 1535 ntBASIC9.25□□□□□ -0.93
Hoxd3P09027 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Hoxd3P09027 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.24□□□□□ -0.93
Hoxd3P09027 Gm26836-201ENSMUST00000181056 1568 ntTSL 5 BASIC9.24□□□□□ -0.93
Hoxd3P09027 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC9.24□□□□□ -0.93
Hoxd3P09027 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Hoxd3P09027 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC9.24□□□□□ -0.93
Hoxd3P09027 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Hoxd3P09027 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.24□□□□□ -0.93
Hoxd3P09027 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC9.24□□□□□ -0.93
Hoxd3P09027 Gm14862-201ENSMUST00000115553 870 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Gm13611-201ENSMUST00000118269 318 ntBASIC9.24□□□□□ -0.93
Hoxd3P09027 Gm14724-201ENSMUST00000118400 537 ntBASIC9.24□□□□□ -0.93
Hoxd3P09027 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC9.24□□□□□ -0.93
Hoxd3P09027 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Hoxd3P09027 Gm8100-201ENSMUST00000182906 988 ntBASIC9.24□□□□□ -0.93
Hoxd3P09027 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.24□□□□□ -0.93
Hoxd3P09027 Gm2965-201ENSMUST00000198365 343 ntBASIC9.24□□□□□ -0.93
Hoxd3P09027 AC153801.1-201ENSMUST00000217904 947 ntBASIC9.24□□□□□ -0.93
Hoxd3P09027 AC124569.4-201ENSMUST00000223830 1220 ntBASIC9.24□□□□□ -0.93
Hoxd3P09027 Gm1821-202ENSMUST00000227415 750 ntBASIC9.24□□□□□ -0.93
Hoxd3P09027 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Hoxd3P09027 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Hoxd3P09027 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Gm44292-201ENSMUST00000205194 2364 ntBASIC9.24□□□□□ -0.93
Hoxd3P09027 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Hoxd3P09027 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC9.24□□□□□ -0.93
Hoxd3P09027 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Gm42462-201ENSMUST00000196543 1363 ntBASIC9.24□□□□□ -0.93
Hoxd3P09027 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Hoxd3P09027 Gm37391-201ENSMUST00000194891 2318 ntBASIC9.23□□□□□ -0.93
Hoxd3P09027 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxd3P09027 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC9.23□□□□□ -0.93
Hoxd3P09027 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxd3P09027 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxd3P09027 Gm19817-201ENSMUST00000199764 2132 ntBASIC9.23□□□□□ -0.93
Hoxd3P09027 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxd3P09027 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxd3P09027 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxd3P09027 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC9.23□□□□□ -0.93
Hoxd3P09027 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxd3P09027 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Hoxd3P09027 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Hoxd3P09027 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms