Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxb3P09026 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxb3P09026 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hoxb3P09026 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hoxb3P09026 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Hoxb3P09026 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Gm11858-201ENSMUST00000117935 838 ntBASIC11.74□□□□□ -0.53
Hoxb3P09026 Gm13351-201ENSMUST00000118087 414 ntBASIC11.74□□□□□ -0.53
Hoxb3P09026 Gm11957-201ENSMUST00000118304 779 ntBASIC11.74□□□□□ -0.53
Hoxb3P09026 Gm14791-201ENSMUST00000119061 1166 ntBASIC11.74□□□□□ -0.53
Hoxb3P09026 Gm15610-201ENSMUST00000120584 195 ntBASIC11.74□□□□□ -0.53
Hoxb3P09026 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC11.74□□□□□ -0.53
Hoxb3P09026 Gm24078-201ENSMUST00000158184 103 ntBASIC11.74□□□□□ -0.53
Hoxb3P09026 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC11.74□□□□□ -0.53
Hoxb3P09026 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC11.74□□□□□ -0.53
Hoxb3P09026 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Hoxb3P09026 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC11.74□□□□□ -0.53
Hoxb3P09026 Gm5190-201ENSMUST00000192434 357 ntBASIC11.74□□□□□ -0.53
Hoxb3P09026 Gm37197-201ENSMUST00000195607 401 ntBASIC11.74□□□□□ -0.53
Hoxb3P09026 Gm43866-201ENSMUST00000203894 839 ntBASIC11.74□□□□□ -0.53
Hoxb3P09026 Gm7238-201ENSMUST00000206467 973 ntBASIC11.74□□□□□ -0.53
Hoxb3P09026 Gm45259-201ENSMUST00000209217 1006 ntBASIC11.74□□□□□ -0.53
Hoxb3P09026 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC11.74□□□□□ -0.53
Hoxb3P09026 Gm5178-201ENSMUST00000219380 898 ntBASIC11.74□□□□□ -0.53
Hoxb3P09026 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.74□□□□□ -0.53
Hoxb3P09026 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hoxb3P09026 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hoxb3P09026 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.74□□□□□ -0.53
Hoxb3P09026 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Gm43216-201ENSMUST00000196295 1333 ntBASIC11.74□□□□□ -0.53
Hoxb3P09026 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.74□□□□□ -0.53
Hoxb3P09026 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Hoxb3P09026 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hoxb3P09026 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.74□□□□□ -0.53
Hoxb3P09026 Map1b-203ENSMUST00000223725 2669 ntBASIC11.73□□□□□ -0.53
Hoxb3P09026 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxb3P09026 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxb3P09026 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxb3P09026 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxb3P09026 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Hoxb3P09026 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxb3P09026 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxb3P09026 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxb3P09026 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hoxb3P09026 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC11.73□□□□□ -0.53
Hoxb3P09026 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hoxb3P09026 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxb3P09026 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxb3P09026 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxb3P09026 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxb3P09026 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.73□□□□□ -0.53
Hoxb3P09026 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxb3P09026 Gm24398-201ENSMUST00000157870 109 ntBASIC11.73□□□□□ -0.53
Hoxb3P09026 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Hoxb3P09026 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
Hoxb3P09026 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxb3P09026 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxb3P09026 Gm9081-201ENSMUST00000182346 991 ntBASIC11.73□□□□□ -0.53
Hoxb3P09026 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC11.73□□□□□ -0.53
Hoxb3P09026 Gm4654-201ENSMUST00000183305 982 ntBASIC11.73□□□□□ -0.53
Hoxb3P09026 Mir8115-201ENSMUST00000184992 119 ntBASIC11.73□□□□□ -0.53
Hoxb3P09026 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC11.73□□□□□ -0.53
Hoxb3P09026 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC11.73□□□□□ -0.53
Hoxb3P09026 Gm29036-201ENSMUST00000189967 877 ntBASIC11.73□□□□□ -0.53
Hoxb3P09026 Gm29516-201ENSMUST00000190402 468 ntBASIC11.73□□□□□ -0.53
Hoxb3P09026 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC11.73□□□□□ -0.53
Hoxb3P09026 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxb3P09026 AC159810.1-201ENSMUST00000214838 1480 ntBASIC11.73□□□□□ -0.53
Hoxb3P09026 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.73□□□□□ -0.53
Hoxb3P09026 AC153544.1-201ENSMUST00000217988 400 ntBASIC11.73□□□□□ -0.53
Hoxb3P09026 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC11.73□□□□□ -0.53
Hoxb3P09026 Gm6562-201ENSMUST00000221903 464 ntBASIC11.73□□□□□ -0.53
Hoxb3P09026 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxb3P09026 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.73□□□□□ -0.53
Hoxb3P09026 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hoxb3P09026 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Hoxb3P09026 Tmem212-201ENSMUST00000058077 716 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxb3P09026 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hoxb3P09026 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms