Protein–RNA interactions for Protein: P06728

Apoa4, Apolipoprotein A-IV, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa4P06728 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Apoa4P06728 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.32□□□□□ -0.6
Apoa4P06728 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Apoa4P06728 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.32□□□□□ -0.6
Apoa4P06728 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Apoa4P06728 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Apoa4P06728 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Apoa4P06728 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Apoa4P06728 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Apoa4P06728 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Apoa4P06728 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.32□□□□□ -0.6
Apoa4P06728 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Apoa4P06728 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Apoa4P06728 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Gm13350-201ENSMUST00000120519 479 ntBASIC11.32□□□□□ -0.6
Apoa4P06728 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Gm3329-201ENSMUST00000159873 556 ntBASIC11.32□□□□□ -0.6
Apoa4P06728 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.32□□□□□ -0.6
Apoa4P06728 Gm25700-201ENSMUST00000177693 110 ntBASIC11.32□□□□□ -0.6
Apoa4P06728 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11.32□□□□□ -0.6
Apoa4P06728 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.32□□□□□ -0.6
Apoa4P06728 Mir8093-201ENSMUST00000185043 137 ntBASIC11.32□□□□□ -0.6
Apoa4P06728 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.32□□□□□ -0.6
Apoa4P06728 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.32□□□□□ -0.6
Apoa4P06728 Gm17812-201ENSMUST00000204935 318 ntBASIC11.32□□□□□ -0.6
Apoa4P06728 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.32□□□□□ -0.6
Apoa4P06728 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Apoa4P06728 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Apoa4P06728 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Apoa4P06728 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Apoa4P06728 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.32□□□□□ -0.6
Apoa4P06728 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Apoa4P06728 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Apoa4P06728 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Apoa4P06728 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Apoa4P06728 Erich3-203ENSMUST00000189969 3460 ntBASIC11.32□□□□□ -0.6
Apoa4P06728 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Apoa4P06728 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Apoa4P06728 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.31□□□□□ -0.6
Apoa4P06728 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Apoa4P06728 Gm13996-201ENSMUST00000118456 430 ntBASIC11.31□□□□□ -0.6
Apoa4P06728 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
Apoa4P06728 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
Apoa4P06728 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Gm29615-201ENSMUST00000185371 697 ntBASIC11.31□□□□□ -0.6
Apoa4P06728 Gm28224-201ENSMUST00000186078 697 ntBASIC11.31□□□□□ -0.6
Apoa4P06728 Gm29001-201ENSMUST00000186177 697 ntBASIC11.31□□□□□ -0.6
Apoa4P06728 Gm28292-201ENSMUST00000186593 697 ntBASIC11.31□□□□□ -0.6
Apoa4P06728 Gm28101-201ENSMUST00000187608 697 ntBASIC11.31□□□□□ -0.6
Apoa4P06728 Gm29076-201ENSMUST00000187689 697 ntBASIC11.31□□□□□ -0.6
Apoa4P06728 Gm28302-201ENSMUST00000187931 697 ntBASIC11.31□□□□□ -0.6
Apoa4P06728 Gm28646-201ENSMUST00000188220 697 ntBASIC11.31□□□□□ -0.6
Apoa4P06728 Gm28205-201ENSMUST00000189177 697 ntBASIC11.31□□□□□ -0.6
Apoa4P06728 Gm29032-201ENSMUST00000189797 697 ntBASIC11.31□□□□□ -0.6
Apoa4P06728 Gm28695-201ENSMUST00000190300 697 ntBASIC11.31□□□□□ -0.6
Apoa4P06728 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Apoa4P06728 Gm37448-201ENSMUST00000192795 697 ntBASIC11.31□□□□□ -0.6
Apoa4P06728 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.31□□□□□ -0.6
Apoa4P06728 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms