Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PdgfrbP05622 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
PdgfrbP05622 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.71□□□□□ -0.53
PdgfrbP05622 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
PdgfrbP05622 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
PdgfrbP05622 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
PdgfrbP05622 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
PdgfrbP05622 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
PdgfrbP05622 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.71□□□□□ -0.53
PdgfrbP05622 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
PdgfrbP05622 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.53
PdgfrbP05622 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Gm14071-201ENSMUST00000117817 509 ntBASIC11.71□□□□□ -0.53
PdgfrbP05622 Gm13461-201ENSMUST00000120980 662 ntBASIC11.71□□□□□ -0.53
PdgfrbP05622 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
PdgfrbP05622 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.71□□□□□ -0.53
PdgfrbP05622 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Mir6927-201ENSMUST00000184494 71 ntBASIC11.71□□□□□ -0.53
PdgfrbP05622 Gm38151-201ENSMUST00000195085 289 ntBASIC11.71□□□□□ -0.53
PdgfrbP05622 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Gm7441-201ENSMUST00000220697 1074 ntBASIC11.71□□□□□ -0.53
PdgfrbP05622 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
PdgfrbP05622 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PdgfrbP05622 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PdgfrbP05622 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PdgfrbP05622 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PdgfrbP05622 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
PdgfrbP05622 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
PdgfrbP05622 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PdgfrbP05622 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
PdgfrbP05622 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
PdgfrbP05622 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
PdgfrbP05622 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PdgfrbP05622 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
PdgfrbP05622 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
PdgfrbP05622 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.7□□□□□ -0.54
PdgfrbP05622 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
PdgfrbP05622 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
PdgfrbP05622 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
PdgfrbP05622 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Gm14058-201ENSMUST00000116082 735 ntBASIC11.7□□□□□ -0.54
PdgfrbP05622 Gm7857-201ENSMUST00000117957 358 ntBASIC11.7□□□□□ -0.54
PdgfrbP05622 Gm12579-201ENSMUST00000118040 783 ntBASIC11.7□□□□□ -0.54
PdgfrbP05622 Gm11450-201ENSMUST00000121144 333 ntBASIC11.7□□□□□ -0.54
PdgfrbP05622 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.7□□□□□ -0.54
PdgfrbP05622 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.7□□□□□ -0.54
PdgfrbP05622 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.7□□□□□ -0.54
PdgfrbP05622 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.7□□□□□ -0.54
PdgfrbP05622 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.7□□□□□ -0.54
PdgfrbP05622 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.7□□□□□ -0.54
PdgfrbP05622 Gm4482-201ENSMUST00000200876 742 ntBASIC11.7□□□□□ -0.54
PdgfrbP05622 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Gm5369-201ENSMUST00000217499 588 ntBASIC11.7□□□□□ -0.54
PdgfrbP05622 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.7□□□□□ -0.54
PdgfrbP05622 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
PdgfrbP05622 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Gm10254-201ENSMUST00000052888 867 ntBASIC11.7□□□□□ -0.54
PdgfrbP05622 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
PdgfrbP05622 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
PdgfrbP05622 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms