Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
P01852 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.57□□□□□ -0.72
P01852 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
P01852 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Gm11700-201ENSMUST00000119409 403 ntBASIC10.57□□□□□ -0.72
P01852 Gm15595-201ENSMUST00000120840 961 ntBASIC10.57□□□□□ -0.72
P01852 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.57□□□□□ -0.72
P01852 Gm15566-201ENSMUST00000121130 590 ntBASIC10.57□□□□□ -0.72
P01852 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.57□□□□□ -0.72
P01852 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.57□□□□□ -0.72
P01852 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Mir8093-201ENSMUST00000185043 137 ntBASIC10.57□□□□□ -0.72
P01852 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
P01852 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.57□□□□□ -0.72
P01852 Gm38151-201ENSMUST00000195085 289 ntBASIC10.57□□□□□ -0.72
P01852 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.57□□□□□ -0.72
P01852 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC10.57□□□□□ -0.72
P01852 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.57□□□□□ -0.72
P01852 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
P01852 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.57□□□□□ -0.72
P01852 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.57□□□□□ -0.72
P01852 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.57□□□□□ -0.72
P01852 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.57□□□□□ -0.72
P01852 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
P01852 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
P01852 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.56□□□□□ -0.72
P01852 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
P01852 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
P01852 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
P01852 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
P01852 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Gm11960-201ENSMUST00000122068 925 ntBASIC10.56□□□□□ -0.72
P01852 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10.56□□□□□ -0.72
P01852 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.56□□□□□ -0.72
P01852 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
P01852 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.56□□□□□ -0.72
P01852 Gm20426-201ENSMUST00000173657 440 ntBASIC10.56□□□□□ -0.72
P01852 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.56□□□□□ -0.72
P01852 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.56□□□□□ -0.72
P01852 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.56□□□□□ -0.72
P01852 Gm9540-201ENSMUST00000188230 478 ntBASIC10.56□□□□□ -0.72
P01852 Gm37835-201ENSMUST00000193305 361 ntBASIC10.56□□□□□ -0.72
P01852 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.56□□□□□ -0.72
P01852 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.56□□□□□ -0.72
P01852 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.56□□□□□ -0.72
P01852 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
P01852 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
P01852 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
P01852 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.56□□□□□ -0.72
P01852 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P01852 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms