Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC8.4□□□□□ -1.06
TcraP01849 Gm17980-201ENSMUST00000217977 2349 ntBASIC8.4□□□□□ -1.06
TcraP01849 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Gm42449-201ENSMUST00000200349 2258 ntBASIC8.4□□□□□ -1.06
TcraP01849 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
TcraP01849 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC8.4□□□□□ -1.06
TcraP01849 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
TcraP01849 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC8.4□□□□□ -1.06
TcraP01849 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Gm11424-201ENSMUST00000121929 829 ntBASIC8.4□□□□□ -1.06
TcraP01849 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
TcraP01849 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC8.4□□□□□ -1.06
TcraP01849 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
TcraP01849 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Gm9299-201ENSMUST00000206392 1140 ntBASIC8.4□□□□□ -1.06
TcraP01849 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
TcraP01849 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TcraP01849 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.07
TcraP01849 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
TcraP01849 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
TcraP01849 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
TcraP01849 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
TcraP01849 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
TcraP01849 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
TcraP01849 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
TcraP01849 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
TcraP01849 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC8.4□□□□□ -1.07
TcraP01849 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
TcraP01849 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
TcraP01849 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
TcraP01849 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC8.39□□□□□ -1.07
TcraP01849 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
TcraP01849 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
TcraP01849 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
TcraP01849 Gm19972-201ENSMUST00000218180 5664 ntBASIC8.39□□□□□ -1.07
TcraP01849 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Gm5740-201ENSMUST00000211003 1857 ntBASIC8.39□□□□□ -1.07
TcraP01849 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
TcraP01849 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC8.39□□□□□ -1.07
TcraP01849 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC8.39□□□□□ -1.07
TcraP01849 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Gm11700-201ENSMUST00000119409 403 ntBASIC8.39□□□□□ -1.07
TcraP01849 Gm1335-201ENSMUST00000121653 386 ntBASIC8.39□□□□□ -1.07
TcraP01849 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC8.39□□□□□ -1.07
TcraP01849 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC8.39□□□□□ -1.07
TcraP01849 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Gm7561-201ENSMUST00000211203 886 ntBASIC8.39□□□□□ -1.07
TcraP01849 Gm40466-201ENSMUST00000212174 422 ntBASIC8.39□□□□□ -1.07
TcraP01849 AC140375.2-201ENSMUST00000225283 584 ntBASIC8.39□□□□□ -1.07
TcraP01849 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC8.39□□□□□ -1.07
TcraP01849 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
TcraP01849 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TcraP01849 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC8.39□□□□□ -1.07
TcraP01849 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms