Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.48□□□□□ -0.41
Vti1aO89116 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vti1aO89116 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Vti1aO89116 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Vti1aO89116 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vti1aO89116 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Vti1aO89116 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.48□□□□□ -0.41
Vti1aO89116 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Vti1aO89116 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Vti1aO89116 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Vti1aO89116 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Vti1aO89116 Gm26013-201ENSMUST00000104404 119 ntBASIC12.47□□□□□ -0.41
Vti1aO89116 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Vti1aO89116 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.47□□□□□ -0.41
Vti1aO89116 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.47□□□□□ -0.41
Vti1aO89116 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Vti1aO89116 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.47□□□□□ -0.41
Vti1aO89116 Gm37905-201ENSMUST00000195310 341 ntBASIC12.47□□□□□ -0.41
Vti1aO89116 Gm43520-201ENSMUST00000197996 164 ntBASIC12.47□□□□□ -0.41
Vti1aO89116 Gm44506-201ENSMUST00000206278 965 ntBASIC12.47□□□□□ -0.41
Vti1aO89116 Gm17931-201ENSMUST00000208132 634 ntBASIC12.47□□□□□ -0.41
Vti1aO89116 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.47□□□□□ -0.41
Vti1aO89116 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.47□□□□□ -0.41
Vti1aO89116 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.47□□□□□ -0.41
Vti1aO89116 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Vti1aO89116 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Vti1aO89116 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Vti1aO89116 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Vti1aO89116 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.46□□□□□ -0.41
Vti1aO89116 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Vti1aO89116 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Vti1aO89116 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Mir1901-201ENSMUST00000122616 78 ntBASIC12.46□□□□□ -0.41
Vti1aO89116 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.46□□□□□ -0.41
Vti1aO89116 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC12.46□□□□□ -0.41
Vti1aO89116 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Vti1aO89116 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Gm22442-201ENSMUST00000157256 144 ntBASIC12.46□□□□□ -0.41
Vti1aO89116 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.46□□□□□ -0.41
Vti1aO89116 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Vti1aO89116 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.46□□□□□ -0.41
Vti1aO89116 Gm3551-201ENSMUST00000190750 664 ntBASIC12.46□□□□□ -0.41
Vti1aO89116 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.46□□□□□ -0.41
Vti1aO89116 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Vti1aO89116 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.46□□□□□ -0.41
Vti1aO89116 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vti1aO89116 Gm42657-201ENSMUST00000201746 211 ntBASIC12.46□□□□□ -0.41
Vti1aO89116 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.46□□□□□ -0.41
Vti1aO89116 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms