Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ubr1O70481 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ubr1O70481 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Ubr1O70481 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ubr1O70481 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC14.69□□□□□ -0.06
Ubr1O70481 Treml4-203ENSMUST00000136272 811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Treml4-206ENSMUST00000154335 838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Gm26368-201ENSMUST00000157826 118 ntBASIC14.69□□□□□ -0.06
Ubr1O70481 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Ubr1O70481 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
Ubr1O70481 AC164556.1-201ENSMUST00000221318 751 ntBASIC14.69□□□□□ -0.06
Ubr1O70481 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Ubr1O70481 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Ubr1O70481 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ubr1O70481 Paupar-201ENSMUST00000194826 3482 ntBASIC14.69□□□□□ -0.06
Ubr1O70481 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.68□□□□□ -0.06
Ubr1O70481 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ubr1O70481 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC14.68□□□□□ -0.06
Ubr1O70481 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ubr1O70481 Gm44498-201ENSMUST00000199509 111 ntBASIC14.68□□□□□ -0.06
Ubr1O70481 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Ubr1O70481 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC14.68□□□□□ -0.06
Ubr1O70481 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC14.68□□□□□ -0.06
Ubr1O70481 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC14.68□□□□□ -0.06
Ubr1O70481 Gm45258-201ENSMUST00000210042 853 ntBASIC14.68□□□□□ -0.06
Ubr1O70481 Gm8170-201ENSMUST00000218581 945 ntBASIC14.68□□□□□ -0.06
Ubr1O70481 Gm10020-201ENSMUST00000081993 612 ntBASIC14.68□□□□□ -0.06
Ubr1O70481 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.68□□□□□ -0.06
Ubr1O70481 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Gm5764-201ENSMUST00000118817 885 ntBASIC14.68□□□□□ -0.06
Ubr1O70481 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC14.68□□□□□ -0.06
Ubr1O70481 Gm27440-201ENSMUST00000184785 107 ntBASIC14.68□□□□□ -0.06
Ubr1O70481 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC14.68□□□□□ -0.06
Ubr1O70481 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ubr1O70481 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.67□□□□□ -0.06
Ubr1O70481 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ubr1O70481 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ubr1O70481 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubr1O70481 Prss23os-202ENSMUST00000179361 1362 ntBASIC14.67□□□□□ -0.06
Ubr1O70481 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubr1O70481 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubr1O70481 Gm11470-201ENSMUST00000118868 1475 ntBASIC14.67□□□□□ -0.06
Ubr1O70481 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubr1O70481 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ubr1O70481 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC14.67□□□□□ -0.06
Ubr1O70481 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubr1O70481 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ubr1O70481 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ubr1O70481 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubr1O70481 Gm37160-201ENSMUST00000193081 1689 ntBASIC14.67□□□□□ -0.06
Ubr1O70481 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ubr1O70481 Gm15031-201ENSMUST00000121341 210 ntBASIC14.67□□□□□ -0.06
Ubr1O70481 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ubr1O70481 Gm45135-201ENSMUST00000206787 1184 ntBASIC14.67□□□□□ -0.06
Ubr1O70481 Gm8162-201ENSMUST00000213951 665 ntBASIC14.67□□□□□ -0.06
Ubr1O70481 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ubr1O70481 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC14.67□□□□□ -0.06
Ubr1O70481 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ubr1O70481 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ubr1O70481 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ubr1O70481 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms