Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.22□□□□□ -0.45
Itgb3O54890 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Itgb3O54890 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Itgb3O54890 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.22□□□□□ -0.45
Itgb3O54890 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Itgb3O54890 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Itgb3O54890 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Itgb3O54890 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Itgb3O54890 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Itgb3O54890 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Itgb3O54890 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Itgb3O54890 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.21□□□□□ -0.45
Itgb3O54890 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Itgb3O54890 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Itgb3O54890 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Itgb3O54890 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Itgb3O54890 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.21□□□□□ -0.45
Itgb3O54890 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.21□□□□□ -0.45
Itgb3O54890 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Itgb3O54890 Gm14942-201ENSMUST00000119642 336 ntBASIC12.21□□□□□ -0.45
Itgb3O54890 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.21□□□□□ -0.45
Itgb3O54890 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.21□□□□□ -0.45
Itgb3O54890 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.21□□□□□ -0.45
Itgb3O54890 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.21□□□□□ -0.45
Itgb3O54890 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.21□□□□□ -0.45
Itgb3O54890 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Itgb3O54890 Gm8365-201ENSMUST00000197334 648 ntBASIC12.21□□□□□ -0.45
Itgb3O54890 Gm44551-201ENSMUST00000208804 171 ntBASIC12.21□□□□□ -0.45
Itgb3O54890 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.21□□□□□ -0.45
Itgb3O54890 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Itgb3O54890 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Itgb3O54890 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Itgb3O54890 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Itgb3O54890 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Itgb3O54890 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.21□□□□□ -0.45
Itgb3O54890 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Itgb3O54890 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Itgb3O54890 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.21□□□□□ -0.46
Itgb3O54890 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Itgb3O54890 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Itgb3O54890 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Itgb3O54890 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Itgb3O54890 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.21□□□□□ -0.46
Itgb3O54890 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.21□□□□□ -0.46
Itgb3O54890 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Itgb3O54890 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.46
Itgb3O54890 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.21□□□□□ -0.46
Itgb3O54890 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Itgb3O54890 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Itgb3O54890 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Itgb3O54890 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.2□□□□□ -0.46
Itgb3O54890 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 AC169511.2-201ENSMUST00000226674 2063 ntBASIC12.2□□□□□ -0.46
Itgb3O54890 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Itgb3O54890 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC12.2□□□□□ -0.46
Itgb3O54890 Mir7076-201ENSMUST00000183519 74 ntBASIC12.2□□□□□ -0.46
Itgb3O54890 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.2□□□□□ -0.46
Itgb3O54890 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.2□□□□□ -0.46
Itgb3O54890 Gm43002-201ENSMUST00000200310 155 ntBASIC12.2□□□□□ -0.46
Itgb3O54890 Gm44008-201ENSMUST00000204345 412 ntBASIC12.2□□□□□ -0.46
Itgb3O54890 AC073947.1-201ENSMUST00000216991 649 ntBASIC12.2□□□□□ -0.46
Itgb3O54890 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Itgb3O54890 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Itgb3O54890 Gm37122-201ENSMUST00000195313 1567 ntBASIC12.2□□□□□ -0.46
Itgb3O54890 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Itgb3O54890 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Itgb3O54890 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 394.1 ms