Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm11660-201ENSMUST00000120955 412 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm3329-201ENSMUST00000159873 556 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm5070-201ENSMUST00000177599 862 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm28937-201ENSMUST00000185413 695 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm29400-201ENSMUST00000187208 695 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm28662-201ENSMUST00000188446 695 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm28251-201ENSMUST00000188835 695 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm37318-201ENSMUST00000194325 695 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm38017-201ENSMUST00000194768 695 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm37287-201ENSMUST00000195449 695 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm37793-201ENSMUST00000195548 695 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm5982-201ENSMUST00000196234 512 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm44974-201ENSMUST00000206387 1279 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm9368-201ENSMUST00000219348 831 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gm1840-201ENSMUST00000051687 1432 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Pcdh1F7BJK1 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Gm15547-201ENSMUST00000122152 333 ntBASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Gm27501-201ENSMUST00000183599 107 ntBASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Gm6450-201ENSMUST00000200896 574 ntBASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pcdh1F7BJK1 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms