Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ube4aE9Q735 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ube4aE9Q735 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ube4aE9Q735 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ube4aE9Q735 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ube4aE9Q735 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ube4aE9Q735 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Gm12816-201ENSMUST00000118069 1212 ntBASIC13.8□□□□□ -0.2
Ube4aE9Q735 Gm9133-201ENSMUST00000118289 540 ntBASIC13.8□□□□□ -0.2
Ube4aE9Q735 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Gm12783-201ENSMUST00000121425 397 ntBASIC13.8□□□□□ -0.2
Ube4aE9Q735 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Gm22846-201ENSMUST00000157706 270 ntBASIC13.8□□□□□ -0.2
Ube4aE9Q735 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Gm6423-201ENSMUST00000204315 934 ntBASIC13.8□□□□□ -0.2
Ube4aE9Q735 AC122024.3-201ENSMUST00000217719 294 ntBASIC13.8□□□□□ -0.2
Ube4aE9Q735 Id2-203ENSMUST00000222667 958 ntBASIC13.8□□□□□ -0.2
Ube4aE9Q735 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.8□□□□□ -0.2
Ube4aE9Q735 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.8□□□□□ -0.2
Ube4aE9Q735 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC13.8□□□□□ -0.2
Ube4aE9Q735 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.8□□□□□ -0.2
Ube4aE9Q735 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ube4aE9Q735 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.79□□□□□ -0.2
Ube4aE9Q735 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.79□□□□□ -0.2
Ube4aE9Q735 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.79□□□□□ -0.2
Ube4aE9Q735 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC13.79□□□□□ -0.2
Ube4aE9Q735 AC158392.3-201ENSMUST00000224271 1284 ntBASIC13.79□□□□□ -0.2
Ube4aE9Q735 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ube4aE9Q735 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.79□□□□□ -0.2
Ube4aE9Q735 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ube4aE9Q735 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Gm14497-201ENSMUST00000119537 580 ntBASIC13.78□□□□□ -0.2
Ube4aE9Q735 Gm25343-201ENSMUST00000157460 107 ntBASIC13.78□□□□□ -0.2
Ube4aE9Q735 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.78□□□□□ -0.2
Ube4aE9Q735 Gm43002-201ENSMUST00000200310 155 ntBASIC13.78□□□□□ -0.2
Ube4aE9Q735 Gm42867-201ENSMUST00000202995 469 ntBASIC13.78□□□□□ -0.2
Ube4aE9Q735 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC13.78□□□□□ -0.2
Ube4aE9Q735 AC159002.1-201ENSMUST00000226714 924 ntBASIC13.78□□□□□ -0.2
Ube4aE9Q735 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.78□□□□□ -0.2
Ube4aE9Q735 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ube4aE9Q735 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms