Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm12887B1AVM1 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm12887B1AVM1 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm12887B1AVM1 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Gm12887B1AVM1 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.29□□□□□ -0.92
Gm12887B1AVM1 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Gm12887B1AVM1 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm12887B1AVM1 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Gm12887B1AVM1 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.29□□□□□ -0.92
Gm12887B1AVM1 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm12887B1AVM1 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm12887B1AVM1 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Gm12887B1AVM1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm12887B1AVM1 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm12887B1AVM1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC9.29□□□□□ -0.92
Gm12887B1AVM1 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Gm12887B1AVM1 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Gm9002-201ENSMUST00000178437 499 ntBASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Gm7183-201ENSMUST00000213870 1005 ntBASIC9.28□□□□□ -0.92
Gm12887B1AVM1 AC159896.2-201ENSMUST00000214753 269 ntBASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Gm19221-201ENSMUST00000221827 1477 ntBASIC9.28□□□□□ -0.92
Gm12887B1AVM1 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm12887B1AVM1 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Gm12887B1AVM1 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm12887B1AVM1 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Gm12887B1AVM1 Gm38271-201ENSMUST00000192296 1603 ntBASIC9.27□□□□□ -0.92
Gm12887B1AVM1 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm12887B1AVM1 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm12887B1AVM1 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm12887B1AVM1 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm12887B1AVM1 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm12887B1AVM1 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Gm12887B1AVM1 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Gm12887B1AVM1 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm12887B1AVM1 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm12887B1AVM1 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm12887B1AVM1 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Gm12887B1AVM1 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Gm12887B1AVM1 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm12887B1AVM1 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC9.27□□□□□ -0.93
Gm12887B1AVM1 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm12887B1AVM1 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Gm12887B1AVM1 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC9.27□□□□□ -0.93
Gm12887B1AVM1 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Gm12887B1AVM1 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Gm12887B1AVM1 Gm2546-201ENSMUST00000182630 991 ntBASIC9.27□□□□□ -0.93
Gm12887B1AVM1 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms