Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Gm8706-201ENSMUST00000197372 1491 ntBASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ush1cQ9ES64 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Gm43692-201ENSMUST00000198236 1062 ntBASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Gm6013-201ENSMUST00000212264 699 ntBASIC13.22□□□□□ -0.29
Ush1cQ9ES64 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.22□□□□□ -0.29
Ush1cQ9ES64 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Gm39404-201ENSMUST00000216350 313 ntBASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Gm19309-201ENSMUST00000218295 205 ntBASIC13.22□□□□□ -0.29
Ush1cQ9ES64 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.22□□□□□ -0.29
Ush1cQ9ES64 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Gm10254-201ENSMUST00000052888 867 ntBASIC13.22□□□□□ -0.29
Ush1cQ9ES64 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Gm10076-201ENSMUST00000073238 384 ntBASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ush1cQ9ES64 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Gm22018-201ENSMUST00000104357 131 ntBASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Gm13736-201ENSMUST00000119272 253 ntBASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Mir6420-201ENSMUST00000185032 102 ntBASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Gm38002-201ENSMUST00000193255 180 ntBASIC13.21□□□□□ -0.29
Ush1cQ9ES64 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Gm7399-201ENSMUST00000032395 858 ntBASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ush1cQ9ES64 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ush1cQ9ES64 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ush1cQ9ES64 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ush1cQ9ES64 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ush1cQ9ES64 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ush1cQ9ES64 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ush1cQ9ES64 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Ush1cQ9ES64 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ush1cQ9ES64 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ush1cQ9ES64 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC13.2□□□□□ -0.3
Ush1cQ9ES64 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1cQ9ES64 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1cQ9ES64 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1cQ9ES64 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ush1cQ9ES64 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.2□□□□□ -0.3
Ush1cQ9ES64 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 123.1 ms