Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Gm2965-201ENSMUST00000198365 343 ntBASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Gm2553-201ENSMUST00000215986 605 ntBASIC10.76□□□□□ -0.69
Cdc40Q9DC48 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Gm5705-201ENSMUST00000066241 711 ntBASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Cdc40Q9DC48 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Gm13809-201ENSMUST00000117921 597 ntBASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Gm15004-201ENSMUST00000119192 630 ntBASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Gm15573-201ENSMUST00000119487 540 ntBASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Gm12029-201ENSMUST00000120073 832 ntBASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Gm8199-201ENSMUST00000121323 823 ntBASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Gm9192-201ENSMUST00000183221 985 ntBASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Gm9132-201ENSMUST00000210182 832 ntBASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Gm9797-202ENSMUST00000218003 294 ntBASIC10.75□□□□□ -0.69
Cdc40Q9DC48 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Cdc40Q9DC48 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdc40Q9DC48 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdc40Q9DC48 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdc40Q9DC48 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdc40Q9DC48 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdc40Q9DC48 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdc40Q9DC48 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdc40Q9DC48 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Cdc40Q9DC48 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Cdc40Q9DC48 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdc40Q9DC48 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Cdc40Q9DC48 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms