Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Gm15595-201ENSMUST00000120840 961 ntBASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Gm5982-201ENSMUST00000196234 512 ntBASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.04□□□□□ -0.48
Chmp2aQ9DB34 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Gm8731-201ENSMUST00000118088 412 ntBASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Gm44100-201ENSMUST00000204329 436 ntBASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chmp2aQ9DB34 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp2aQ9DB34 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Chmp2aQ9DB34 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp2aQ9DB34 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp2aQ9DB34 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp2aQ9DB34 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Chmp2aQ9DB34 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp2aQ9DB34 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp2aQ9DB34 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Chmp2aQ9DB34 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Chmp2aQ9DB34 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chmp2aQ9DB34 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.02□□□□□ -0.49
Chmp2aQ9DB34 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms