Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Gm18893-201ENSMUST00000198416 943 ntBASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC12.6□□□□□ -0.39
Ssr1Q9CY50 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Gm14644-201ENSMUST00000116671 647 ntBASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Ssr1Q9CY50 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Ssr1Q9CY50 Cfap61-202ENSMUST00000118002 3230 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Ssr1Q9CY50 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.58□□□□□ -0.39
Ssr1Q9CY50 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ssr1Q9CY50 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Gm14726-201ENSMUST00000120623 896 ntBASIC12.58□□□□□ -0.4
Ssr1Q9CY50 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms