Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Gm11531-201ENSMUST00000117614 555 ntBASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Gm12390-201ENSMUST00000117897 397 ntBASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Gm43118-201ENSMUST00000199149 775 ntBASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Gm9794-201ENSMUST00000202370 423 ntBASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Gm4607-201ENSMUST00000206649 577 ntBASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Gm8752-201ENSMUST00000173427 1694 ntBASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chd1lQ9CXF7 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Gm6023-201ENSMUST00000118217 606 ntBASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Gm12463-201ENSMUST00000118271 849 ntBASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Gm15004-201ENSMUST00000119192 630 ntBASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Gm12490-201ENSMUST00000120255 560 ntBASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Gm5370-201ENSMUST00000187187 574 ntBASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Gm38158-201ENSMUST00000194617 339 ntBASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chd1lQ9CXF7 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 Gm13297-201ENSMUST00000120205 934 ntBASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 Gm3329-201ENSMUST00000159873 556 ntBASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.96□□□□□ -0.33
Chd1lQ9CXF7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms