Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.39□□□□□ -0.59
Cdh23Q99PF4 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Gm38246-201ENSMUST00000194318 1511 ntBASIC11.39□□□□□ -0.59
Cdh23Q99PF4 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.39□□□□□ -0.59
Cdh23Q99PF4 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Cdh23Q99PF4 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Gm32102-201ENSMUST00000196885 241 ntBASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Gm38349-201ENSMUST00000195732 462 ntBASIC11.38□□□□□ -0.59
Cdh23Q99PF4 AC241616.1-201ENSMUST00000213741 166 ntBASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Gm5194-201ENSMUST00000221457 742 ntBASIC11.38□□□□□ -0.59
Cdh23Q99PF4 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Cdh23Q99PF4 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 AC154197.1-201ENSMUST00000225136 1382 ntBASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Birc3-202ENSMUST00000115672 2909 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Gm15476-201ENSMUST00000118247 1191 ntBASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Gm9630-201ENSMUST00000178304 885 ntBASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Gm43965-201ENSMUST00000203779 789 ntBASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Gm18504-201ENSMUST00000220917 929 ntBASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Gm13456-201ENSMUST00000118928 1365 ntBASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cdh23Q99PF4 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms