Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.41□□□□□ -0.42
Tlr3Q99MB1 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tlr3Q99MB1 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Tlr3Q99MB1 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tlr3Q99MB1 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tlr3Q99MB1 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tlr3Q99MB1 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tlr3Q99MB1 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Tlr3Q99MB1 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tlr3Q99MB1 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.41□□□□□ -0.42
Tlr3Q99MB1 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tlr3Q99MB1 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Tlr3Q99MB1 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Tlr3Q99MB1 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Tlr3Q99MB1 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Tlr3Q99MB1 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tlr3Q99MB1 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.41□□□□□ -0.42
Tlr3Q99MB1 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tlr3Q99MB1 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Tlr3Q99MB1 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Gm7851-201ENSMUST00000117574 323 ntBASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Gm12579-201ENSMUST00000118040 783 ntBASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Gm11941-201ENSMUST00000119904 610 ntBASIC12.4□□□□□ -0.42
Tlr3Q99MB1 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Gm43966-201ENSMUST00000203301 612 ntBASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Gm6108-201ENSMUST00000208365 367 ntBASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.4□□□□□ -0.42
Tlr3Q99MB1 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Gm10254-201ENSMUST00000052888 867 ntBASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Gm4978-201ENSMUST00000071565 801 ntBASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Tlr3Q99MB1 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Tlr3Q99MB1 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Tlr3Q99MB1 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Tlr3Q99MB1 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.39□□□□□ -0.43
Tlr3Q99MB1 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Gm45219-201ENSMUST00000205602 465 ntBASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Tlr3Q99MB1 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms