Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Gm5257-201ENSMUST00000121823 790 ntBASIC10.17□□□□□ -0.78
Scrt1Q99M85 Gm11354-201ENSMUST00000121974 422 ntBASIC10.17□□□□□ -0.78
Scrt1Q99M85 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.17□□□□□ -0.78
Scrt1Q99M85 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.17□□□□□ -0.78
Scrt1Q99M85 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Gm29499-201ENSMUST00000189151 486 ntBASIC10.17□□□□□ -0.78
Scrt1Q99M85 Gm28329-201ENSMUST00000191208 689 ntBASIC10.17□□□□□ -0.78
Scrt1Q99M85 Gm29171-201ENSMUST00000191397 486 ntBASIC10.17□□□□□ -0.78
Scrt1Q99M85 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.17□□□□□ -0.78
Scrt1Q99M85 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Scrt1Q99M85 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Gm7959-201ENSMUST00000221823 1078 ntBASIC10.17□□□□□ -0.78
Scrt1Q99M85 AC122350.1-201ENSMUST00000228135 533 ntBASIC10.17□□□□□ -0.78
Scrt1Q99M85 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.17□□□□□ -0.78
Scrt1Q99M85 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Scrt1Q99M85 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.16□□□□□ -0.78
Scrt1Q99M85 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Mir6407-201ENSMUST00000184510 101 ntBASIC10.16□□□□□ -0.78
Scrt1Q99M85 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Scrt1Q99M85 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC10.16□□□□□ -0.78
Scrt1Q99M85 Gm9116-201ENSMUST00000192400 1018 ntBASIC10.16□□□□□ -0.78
Scrt1Q99M85 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC10.16□□□□□ -0.78
Scrt1Q99M85 Gm45410-201ENSMUST00000211331 1093 ntBASIC10.16□□□□□ -0.78
Scrt1Q99M85 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.16□□□□□ -0.78
Scrt1Q99M85 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.16□□□□□ -0.78
Scrt1Q99M85 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 BC043934-202ENSMUST00000185694 2356 ntBASIC10.16□□□□□ -0.78
Scrt1Q99M85 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Scrt1Q99M85 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms