Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Gm5525-201ENSMUST00000190438 1312 ntBASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Gm11660-201ENSMUST00000120955 412 ntBASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Gm2260-201ENSMUST00000184965 657 ntBASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Gm4157-201ENSMUST00000211647 679 ntBASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Gm2553-201ENSMUST00000215986 605 ntBASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.94□□□□□ -0.66
Chmp1b1Q99LU0 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 AC171277.1-201ENSMUST00000216902 1441 ntBASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Gm13996-201ENSMUST00000118456 430 ntBASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Gm12997-201ENSMUST00000120207 640 ntBASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Gm6114-201ENSMUST00000182472 968 ntBASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Mir7677-201ENSMUST00000184226 67 ntBASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Chmp1b1Q99LU0 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms