Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.54□□□□□ -0.72
Lims1Q99JW4 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.53□□□□□ -0.72
Lims1Q99JW4 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.53□□□□□ -0.72
Lims1Q99JW4 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.53□□□□□ -0.72
Lims1Q99JW4 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Gm11509-201ENSMUST00000117358 325 ntBASIC10.53□□□□□ -0.72
Lims1Q99JW4 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Lims1Q99JW4 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC10.53□□□□□ -0.72
Lims1Q99JW4 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Gm5616-201ENSMUST00000165252 384 ntBASIC10.53□□□□□ -0.72
Lims1Q99JW4 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Gm20495-201ENSMUST00000173902 235 ntBASIC10.53□□□□□ -0.72
Lims1Q99JW4 Gm8741-201ENSMUST00000174736 384 ntBASIC10.53□□□□□ -0.72
Lims1Q99JW4 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Rps4l-202ENSMUST00000204242 789 ntBASIC10.53□□□□□ -0.72
Lims1Q99JW4 Gm44651-201ENSMUST00000207343 372 ntBASIC10.53□□□□□ -0.72
Lims1Q99JW4 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.53□□□□□ -0.72
Lims1Q99JW4 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.53□□□□□ -0.72
Lims1Q99JW4 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Lims1Q99JW4 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lims1Q99JW4 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lims1Q99JW4 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lims1Q99JW4 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lims1Q99JW4 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Lims1Q99JW4 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lims1Q99JW4 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Lims1Q99JW4 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Lims1Q99JW4 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.52□□□□□ -0.72
Lims1Q99JW4 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Lims1Q99JW4 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Gm13296-201ENSMUST00000117854 997 ntBASIC10.52□□□□□ -0.73
Lims1Q99JW4 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Lims1Q99JW4 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.52□□□□□ -0.73
Lims1Q99JW4 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Gm44008-201ENSMUST00000204345 412 ntBASIC10.52□□□□□ -0.73
Lims1Q99JW4 Gm4157-201ENSMUST00000211647 679 ntBASIC10.52□□□□□ -0.73
Lims1Q99JW4 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.52□□□□□ -0.73
Lims1Q99JW4 AC123665.1-201ENSMUST00000228204 438 ntBASIC10.52□□□□□ -0.73
Lims1Q99JW4 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Gm43908-201ENSMUST00000205074 1472 ntBASIC10.52□□□□□ -0.73
Lims1Q99JW4 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.52□□□□□ -0.73
Lims1Q99JW4 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Lims1Q99JW4 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.52□□□□□ -0.73
Lims1Q99JW4 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Gm38116-201ENSMUST00000193873 1533 ntBASIC10.52□□□□□ -0.73
Lims1Q99JW4 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lims1Q99JW4 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lims1Q99JW4 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lims1Q99JW4 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lims1Q99JW4 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms