Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Gm15198-201ENSMUST00000117283 177 ntBASIC11.63□□□□□ -0.55
Cdk9Q99J95 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Gm11793-201ENSMUST00000120433 981 ntBASIC11.63□□□□□ -0.55
Cdk9Q99J95 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.63□□□□□ -0.55
Cdk9Q99J95 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.63□□□□□ -0.55
Cdk9Q99J95 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Cdk9Q99J95 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.63□□□□□ -0.55
Cdk9Q99J95 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.63□□□□□ -0.55
Cdk9Q99J95 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.63□□□□□ -0.55
Cdk9Q99J95 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdk9Q99J95 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdk9Q99J95 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Cdk9Q99J95 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC11.62□□□□□ -0.55
Cdk9Q99J95 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.62□□□□□ -0.55
Cdk9Q99J95 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.62□□□□□ -0.55
Cdk9Q99J95 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.62□□□□□ -0.55
Cdk9Q99J95 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.62□□□□□ -0.55
Cdk9Q99J95 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.62□□□□□ -0.55
Cdk9Q99J95 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Gm9996-201ENSMUST00000070359 913 ntBASIC11.62□□□□□ -0.55
Cdk9Q99J95 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.62□□□□□ -0.55
Cdk9Q99J95 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.62□□□□□ -0.55
Cdk9Q99J95 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.62□□□□□ -0.55
Cdk9Q99J95 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.61□□□□□ -0.55
Cdk9Q99J95 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Gm6023-201ENSMUST00000118217 606 ntBASIC11.61□□□□□ -0.55
Cdk9Q99J95 Gm13875-201ENSMUST00000120162 282 ntBASIC11.61□□□□□ -0.55
Cdk9Q99J95 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.61□□□□□ -0.55
Cdk9Q99J95 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.61□□□□□ -0.55
Cdk9Q99J95 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms