Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm8956-201ENSMUST00000203939 825 ntBASIC13.4□□□□□ -0.26
Smc1bQ920F6 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Smc1bQ920F6 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.4□□□□□ -0.26
Smc1bQ920F6 Gm5705-201ENSMUST00000066241 711 ntBASIC13.4□□□□□ -0.26
Smc1bQ920F6 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smc1bQ920F6 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Gm5859-201ENSMUST00000165401 2324 ntBASIC13.39□□□□□ -0.27
Smc1bQ920F6 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Gm29499-201ENSMUST00000189151 486 ntBASIC13.39□□□□□ -0.27
Smc1bQ920F6 Gm28329-201ENSMUST00000191208 689 ntBASIC13.39□□□□□ -0.27
Smc1bQ920F6 Gm29171-201ENSMUST00000191397 486 ntBASIC13.39□□□□□ -0.27
Smc1bQ920F6 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.39□□□□□ -0.27
Smc1bQ920F6 Gm42599-201ENSMUST00000201308 469 ntBASIC13.39□□□□□ -0.27
Smc1bQ920F6 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.39□□□□□ -0.27
Smc1bQ920F6 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.39□□□□□ -0.27
Smc1bQ920F6 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.39□□□□□ -0.27
Smc1bQ920F6 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smc1bQ920F6 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Smc1bQ920F6 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.38□□□□□ -0.27
Smc1bQ920F6 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Gm8815-201ENSMUST00000173809 620 ntBASIC13.38□□□□□ -0.27
Smc1bQ920F6 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Gm3551-201ENSMUST00000190750 664 ntBASIC13.38□□□□□ -0.27
Smc1bQ920F6 Gm44158-201ENSMUST00000203881 505 ntBASIC13.38□□□□□ -0.27
Smc1bQ920F6 Gm44552-201ENSMUST00000205458 1247 ntBASIC13.38□□□□□ -0.27
Smc1bQ920F6 AC140375.1-201ENSMUST00000225421 694 ntBASIC13.38□□□□□ -0.27
Smc1bQ920F6 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smc1bQ920F6 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms